EST details — SGN-C83300
| Search information |
| Request: 83300 | Match: SGN-C83300 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C83300 | Clone name: cLET-24-B22 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C183279 is on microarray TOM1: SGN-S1-1-4.1.3.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183279 [TUS-41-M5] | Trace: SGN-T191514 | EST: SGN-E390188 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183279 [TUS-41-M5] | Trace: SGN-T191719 | EST: SGN-E390393 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E296238 | Length: 642 bp (894 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E296238 [] (trimmed)
GTACTTCTCTGTTCACAAGTCACTATTTTCTCTCTCTACTCTCTCACTGCCAATGGAGTCTCGCGTGTTGACCGGTGGCGCCACCGCCATTCGCG
GTGGTCTCCCACTTCTCCGGAAGCCGGCGGCAGTGATGAAGTTCACCACCGCCGCTACTTGCGGCAGTAACAGGGACTTCCCTGCTGGTGCTGTT
ACGGCTATCCTTCTCGAAGCTTCACCAAAGAGGGAATCCATTAAGCCGTGCTCCGCTGCAGCTTCTTCTTCCGCCGGAAGCAGCGATTCCTCCGG
GGAGGCTAAAATCGGGTTTTTCAACAAAGCAACTCTGACTACCGGGTTTTTCTTCTTCATGTGGTATTTTCTGAATGTGATATTCAATATCCTCA
ACAAGAAGATCTACAATTACTTTCCTTATCCTTATTTTGTTTCTGTTATACATTTGGCTGTTGGAGTGGTATATTGTTTGGTGAGCTGGGCTGTA
GGTCTCCCAAAAAGAGCTCCTATTGATTCAACACAACTGAAGCTGCTCACCCCTGTTGCCTTTTGTCATGCGCTTGGCCATGTTACCAGCAATGT
CTCGTTTGCTGCAGTTGCTGTCTCATTCACTCACACAATTAAAGCTCTGGAACCTTTCTTCAATGCTGCTGC
GTGGTCTCCCACTTCTCCGGAAGCCGGCGGCAGTGATGAAGTTCACCACCGCCGCTACTTGCGGCAGTAACAGGGACTTCCCTGCTGGTGCTGTT
ACGGCTATCCTTCTCGAAGCTTCACCAAAGAGGGAATCCATTAAGCCGTGCTCCGCTGCAGCTTCTTCTTCCGCCGGAAGCAGCGATTCCTCCGG
GGAGGCTAAAATCGGGTTTTTCAACAAAGCAACTCTGACTACCGGGTTTTTCTTCTTCATGTGGTATTTTCTGAATGTGATATTCAATATCCTCA
ACAAGAAGATCTACAATTACTTTCCTTATCCTTATTTTGTTTCTGTTATACATTTGGCTGTTGGAGTGGTATATTGTTTGGTGAGCTGGGCTGTA
GGTCTCCCAAAAAGAGCTCCTATTGATTCAACACAACTGAAGCTGCTCACCCCTGTTGCCTTTTGTCATGCGCTTGGCCATGTTACCAGCAATGT
CTCGTTTGCTGCAGTTGCTGTCTCATTCACTCACACAATTAAAGCTCTGGAACCTTTCTTCAATGCTGCTGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E296238] | SGN-U577579 | Tomato 200607 | Build 2 | 90 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T108755 [Download][View] | Facility Assigned ID: TMEDR11TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0046 | Quality Trim Threshold: 14.5 |
Working
