EST details — SGN-C84435
| Search information |
| Request: 84435 | Match: SGN-C84435 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C84435 | Clone name: cLET-28-M23 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C182112 is on microarray TOM1: SGN-S1-1-3.4.10.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C182112 [TUS-38-L14] | Trace: SGN-T1703 | EST: SGN-E378208 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C182112 [TUS-38-L14] | Trace: SGN-T187732 | EST: SGN-E374462 | Direction: 3' | Facility: INRA |
| Clone: SGN-C182112 [TUS-38-L14] | Trace: SGN-T187733 | EST: SGN-E374463 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E297699 | Length: 451 bp (899 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E297699 [] (trimmed)
CTTCCTTTGAGACTCTCATGGCACGAAAAGAAATTGGTGGACCAGAAGTCATCGAACTTCTAAAGGAATATGAATCTAACTTGATGTGCAAAGGA
AAACGAATGTGGCCAGAACTTATTGGTGTACCAGCACAATATGCTAAGGGAATAATTGAAAAGGAAAATCCATTCATAACTGATGTTCGGATAGG
ATTGATTGGTTCTCCACGCACAGCTGATTTTAAGTGTTTTCGAGTTCGTATTGCTGTAAACATCTTGGATGTTGCTGTATCAATGCCTGTGATTG
GTTAATTAATGAAGTAATTAAGTAGCCACATGTCAAAAAATAATTAGGGTTCATGTCTGTTCATTAATTATAATGTACCCATGCATGTACTCTTA
CAATACATAATGGAATAAATAAGTGTGACTTGATTAAATATTAAATGTAATCTCCCTAATTAAATCTTTTT
AAACGAATGTGGCCAGAACTTATTGGTGTACCAGCACAATATGCTAAGGGAATAATTGAAAAGGAAAATCCATTCATAACTGATGTTCGGATAGG
ATTGATTGGTTCTCCACGCACAGCTGATTTTAAGTGTTTTCGAGTTCGTATTGCTGTAAACATCTTGGATGTTGCTGTATCAATGCCTGTGATTG
GTTAATTAATGAAGTAATTAAGTAGCCACATGTCAAAAAATAATTAGGGTTCATGTCTGTTCATTAATTATAATGTACCCATGCATGTACTCTTA
CAATACATAATGGAATAAATAAGTGTGACTTGATTAAATATTAAATGTAATCTCCCTAATTAAATCTTTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E297699] | SGN-U581582 | Tomato 200607 | Build 2 | 35 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T109493 [Download][View] | Facility Assigned ID: TMEEE84TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.947 | Expected Error Rate: 0.0078 | Quality Trim Threshold: 12.5 |
Working
