EST details — SGN-C84516

Search information 
Request: 84516Match: SGN-C84516
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C84516Clone name: cLET-29-C13
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C182116 is on microarray TOM1: SGN-S1-1-7.4.10.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C182116 [TUS-38-L18] Trace: SGN-T187734 EST: SGN-E374464 Direction: 3' Facility: INRA
Clone: SGN-C182116 [TUS-38-L18] Trace: SGN-T187735 EST: SGN-E374465 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E297235Length: 488 bp (915 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E297235 [] (trimmed) GTTTTGCCGATTGGAAAAATGTCTAGCGCAGCGGATGCTGTTGGAAATCCGATCCCAACATCGGCGGTGCTGATGTCGGCGTCGAAGCACATAGA
TATTAGGTGCCGGAACGAGAATGTAGCATATCTCAAGTGCAAGAAGGACGATCCAAACCCGGAGAAATGCCTCCAAAAAGGTCAACAAGTCACTC
GCTGTGTTCTTAGCCTGTTGAAGGATCTTCATCAGAGGTGTAACAAAGAGATGGATGCTTATGCTGGATGCATGTACTACAACACAAATGAGTTT
GAGATGTGTCGTAATGAGCAGAAGGATTTTGAGAAAGCCTGTCCTTATTGACTCGACTGGCGAATGATGTTTTTCATTTAAGAAATAAAAACTTG
AATGTATTTTGCAAACAGAGAAGAGCATATTGTTGTTAGCTACCTTTCATCAATATGTTTGTGTTTGGAACCCTTTCACAGGGCACTTGCCAATT
TGATGTTACTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E297235] SGN-U577174 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T109650 [Download][View] Facility Assigned ID: TMEEI19TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0233 Quality Trim Threshold: 12.5