EST details — SGN-C84817
| Search information |
| Request: 84817 | Match: SGN-C84817 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C84817 | Clone name: cLET-2-G11 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184535 is on microarray TOM1: SGN-S1-1-4.1.14.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184535 [TUS-45-A13] | Trace: SGN-T198452 | EST: SGN-E397126 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184535 [TUS-45-A13] | Trace: SGN-T198543 | EST: SGN-E397217 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E291429 | Length: 588 bp (915 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E291429 [] (trimmed)
TAAGTTTGCCAAAGATTGGATCCACCTTTACTTTTACTGCTGTTTTCACCAATAGCCGCAATAATTGGAATGAGAAGAAGAGCCAGCAAATAAAC
AATCAATCGAACTCTATTTCTTCAGATTTCCATGGCTTGAGAGCCTTAATTGTCGACCCAAGAACTGTCCGTGCAAGGGTCTCACAGTATCACAT
GAAACGACTTGGAGTCCATACTGAAGTGGTCTCAGATTTGAATCGTGGTTTGTCTCATGTAAGAACTGAAAATGGAGTTACGAATATGATCCTCA
TTGAACAGGAAGTCTGGGATGCTGATTTGGGAAAGTCAAGTCTTTTTGTCAAAAACTTAAGAAAGATCAACGCCAGTAGTTCTCCCAAACTTTTC
ATATTAGCCAATTCTATAAATTCTAGCCGAGCGGGTGTCTCAGTCAACGGTTTTCCTACTCCATTTATCATCATGAAGCCATTAAGAGCAAGTAT
GCTTGCTGCATCACTCCAACGTGCCATGGGCGTTGGTAACAAGGGAAATTGTACAAATGGAGAGCTCTCTGGTATCTCTCTTTCCAAGCTCCTTT
CAGGGAGAAAAATTTTGA
AATCAATCGAACTCTATTTCTTCAGATTTCCATGGCTTGAGAGCCTTAATTGTCGACCCAAGAACTGTCCGTGCAAGGGTCTCACAGTATCACAT
GAAACGACTTGGAGTCCATACTGAAGTGGTCTCAGATTTGAATCGTGGTTTGTCTCATGTAAGAACTGAAAATGGAGTTACGAATATGATCCTCA
TTGAACAGGAAGTCTGGGATGCTGATTTGGGAAAGTCAAGTCTTTTTGTCAAAAACTTAAGAAAGATCAACGCCAGTAGTTCTCCCAAACTTTTC
ATATTAGCCAATTCTATAAATTCTAGCCGAGCGGGTGTCTCAGTCAACGGTTTTCCTACTCCATTTATCATCATGAAGCCATTAAGAGCAAGTAT
GCTTGCTGCATCACTCCAACGTGCCATGGGCGTTGGTAACAAGGGAAATTGTACAAATGGAGAGCTCTCTGGTATCTCTCTTTCCAAGCTCCTTT
CAGGGAGAAAAATTTTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E291429] | SGN-U574362 | Tomato 200607 | Build 2 | 35 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102970 [Download][View] | Facility Assigned ID: TMEAE42TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0052 | Quality Trim Threshold: 14.5 |
Working
