EST details — SGN-C85699
| Search information |
| Request: 85699 | Match: SGN-C85699 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C85699 | Clone name: cLET-3-P12 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C186397 is on microarray TOM1: SGN-S1-1-6.3.5.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E289572 | Length: 311 bp (792 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E289572 [] (trimmed)
GAGAGTTCAGATACCATTGACAATGTGAAAGCAAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAACAGCGTTTGATCTTTGCTGGTAAACA
ACTTGAGGATGGGAGGACTCTTGCAGACTACAACATCCAGAAGGAGTCAACTCTCCATCTGGTGTTGCGTTTGAGAGGAGGGATGCAGATCTTTG
TGAAGACTCTTACTGGGAAGACAATCACATTGGAGGTGGAGAGCTCTGATACTATTGACAATGTGAAAGCAAAGATACAGGACAAGGAAGGGATC
CCACCATATCAACAGAGGCTCATCTT
ACTTGAGGATGGGAGGACTCTTGCAGACTACAACATCCAGAAGGAGTCAACTCTCCATCTGGTGTTGCGTTTGAGAGGAGGGATGCAGATCTTTG
TGAAGACTCTTACTGGGAAGACAATCACATTGGAGGTGGAGAGCTCTGATACTATTGACAATGTGAAAGCAAAGATACAGGACAAGGAAGGGATC
CCACCATATCAACAGAGGCTCATCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E289572] | SGN-U578847 | Tomato 200607 | Build 2 | 67 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T103243 [Download][View] | Facility Assigned ID: TMEAL90TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.954 | Expected Error Rate: 0.0271 | Quality Trim Threshold: 12.5 |
Working
