EST details — SGN-C87551
| Search information |
| Request: 87551 | Match: SGN-C87551 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C87551 | Clone name: cLET-5-B4 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184801 is on microarray TOM1: SGN-S1-1-2.4.14.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184801 [TUS-45-L15] | Trace: SGN-T198730 | EST: SGN-E397404 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184801 [TUS-45-L15] | Trace: SGN-T198731 | EST: SGN-E397405 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290113 | Length: 531 bp (629 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290113 [] (trimmed)
CGAGTCTGCAGACGGTTTTGAACAATGGCGGCTCTGCAGAGCTCCTTTACTGGTCTCTCCATCTACTCCACCTCCTTCTTCGGCCAACGCTTCTC
TCCTCCTCTCTCCCTTGCTCTGGTTAAATCAGCAGAAGGTCCATGTTTGATTACAGCAAAGCTTAAGCGATGGGAGCGTAAAGAATGTACGCCAA
ACAGCCTTCCAGTACTACACAAAATGCATGTAAGGCTGGGTGATACTGTCAAGGTAATCTCCGGCCATGACGAAGGTGAAATTGGAGAGATTACC
GAGATCATCAAGCACAACAGCAAAATAGTAGTAAAAGAGGTGAACTTGAAAACCAAGCATGTGAAGAGTCTGAGTGAGGAGGAACCAGGCCAGAT
AGTCAAGATTGAAGCTCCTATTCACAGCTCAAACGTGATGCTTTATTCAAAAGAGCAGAAGGTAGCCAGTCGGGTTGGTCACAAAACTTTAGACA
ATGGAAAAAGAGTCCGGTACCTCATTAAAACTGGGGAAATCATCGATAGTGCAGAG
TCCTCCTCTCTCCCTTGCTCTGGTTAAATCAGCAGAAGGTCCATGTTTGATTACAGCAAAGCTTAAGCGATGGGAGCGTAAAGAATGTACGCCAA
ACAGCCTTCCAGTACTACACAAAATGCATGTAAGGCTGGGTGATACTGTCAAGGTAATCTCCGGCCATGACGAAGGTGAAATTGGAGAGATTACC
GAGATCATCAAGCACAACAGCAAAATAGTAGTAAAAGAGGTGAACTTGAAAACCAAGCATGTGAAGAGTCTGAGTGAGGAGGAACCAGGCCAGAT
AGTCAAGATTGAAGCTCCTATTCACAGCTCAAACGTGATGCTTTATTCAAAAGAGCAGAAGGTAGCCAGTCGGGTTGGTCACAAAACTTTAGACA
ATGGAAAAAGAGTCCGGTACCTCATTAAAACTGGGGAAATCATCGATAGTGCAGAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290113] | SGN-U566366 | Tomato 200607 | Build 2 | 61 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T103561 [Download][View] | Facility Assigned ID: TMEAT02TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0257 | Quality Trim Threshold: 14.5 |
Working
