EST details — SGN-C88423

Search information 
Request: 88423Match: SGN-C88423
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C88423Clone name: cLET-8-C6
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C184940 is on microarray TOM1: SGN-S1-1-7.2.12.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184940 [TUS-46-B10] Trace: SGN-T191988 EST: SGN-E390662 Direction: 5' Facility: INRA
Clone: SGN-C184940 [TUS-46-B10] Trace: SGN-T192240 EST: SGN-E390914 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E290941Length: 456 bp (642 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E290941 [] (trimmed) CCACGCGCCACCTTCTTAACCTCACGCGCCGCCGCTCTCGAATCACTCCCTTCACCGTTCTCCCACCATGCATTACCTTCTCTTCTCGATCCTCC
ACCTCCATAACCAACCCCTCCCAATCCCCCTCCTTACCCTCCCCACCTCCCCCAGACGCCATGATCTACGATCGCTTAGCTGAACAAGTCAAATC
GAAGATCAAACGCCTCGAAGACCCGAACCCGAGATTCCTCAAGTACAATTCCCCCGATCCTACTGTAGCAGATCACACCTCAATCCTATCAGCAC
CGGAGACGAAAGTCACTACTCTTCCTAATGGTCTTCGTGTTGCTACGGAATCGAATTTGTCTTCACAGACAGCTACTGTTGGAGTTTGGATCGAT
GCTGGATCGCGATTCGAAACTGAGGAGAATAATGGCGTTGCTCATTTCCTTGAGCATATGATTAAGAAAGGAACTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E290941] SGN-U578215 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T104337 [Download][View] Facility Assigned ID: TMEBD15TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0116 Quality Trim Threshold: 14.5