EST details — SGN-C88491
| Search information |
| Request: 88491 | Match: SGN-C88491 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C88491 | Clone name: cLET-8-G23 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184946 is on microarray TOM1: SGN-S1-1-1.2.12.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184946 [TUS-46-B16] | Trace: SGN-T192243 | EST: SGN-E390917 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E291056 | Length: 617 bp (835 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E291056 [] (trimmed)
CAACTGCCGTAACTTTTTTCCACTTCCAACAATGGCATCAGCCATGATTCTCGATCCAAAACCCTCGCCGGAGCTACCTGCAACTCGACCTGACT
TATCGTCACACGACGTTCCTTCCGAAAACGGCGAAGACGACCTCTACGCTCGCCTGAATTCTCTACAACGGCAGCTGGAGTTCATCGAGATCCAA
GAGGAATACGTGAAGGACGAACTGAAGAATCTCCGCCGTGAACATTTACGGGCGCAGGAAGAGGTAAAACGGATCCAATCGGTGCCGTTAGTAAT
TGGCCAGTTCATGGAGATGATTGACCAGAATAACGCCATAGTTGGTTCAACTACGGGATCTAATTACTACGTGAGGATACTCAGCACGATTAATC
GGGAGCTACTTAAGCCTTCGGCTTCTGTGGCTTTACATCGTCACTCGAATGCTCTAGTTGATGTATTGCCTCCTGAGGCTGACTCGAGTATTTCG
CTGCTAAGCCAATCAGAGAAGCCTGATGTTACCTACAACGATATTGGAGGATGTGACATTCAAAAGCAGGAAATTCGTGAGGCTGTTGAGTTACC
TTTGACTCATCATGAGTTGTACAAGCAGATTGGTATAGATCCTCCCC
TATCGTCACACGACGTTCCTTCCGAAAACGGCGAAGACGACCTCTACGCTCGCCTGAATTCTCTACAACGGCAGCTGGAGTTCATCGAGATCCAA
GAGGAATACGTGAAGGACGAACTGAAGAATCTCCGCCGTGAACATTTACGGGCGCAGGAAGAGGTAAAACGGATCCAATCGGTGCCGTTAGTAAT
TGGCCAGTTCATGGAGATGATTGACCAGAATAACGCCATAGTTGGTTCAACTACGGGATCTAATTACTACGTGAGGATACTCAGCACGATTAATC
GGGAGCTACTTAAGCCTTCGGCTTCTGTGGCTTTACATCGTCACTCGAATGCTCTAGTTGATGTATTGCCTCCTGAGGCTGACTCGAGTATTTCG
CTGCTAAGCCAATCAGAGAAGCCTGATGTTACCTACAACGATATTGGAGGATGTGACATTCAAAAGCAGGAAATTCGTGAGGCTGTTGAGTTACC
TTTGACTCATCATGAGTTGTACAAGCAGATTGGTATAGATCCTCCCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E291056] | SGN-U573933 | Tomato 200607 | Build 2 | 83 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T104452 [Download][View] | Facility Assigned ID: TMEBC48TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.988 | Expected Error Rate: 0.0031 | Quality Trim Threshold: 14.5 |
Working
