EST details — SGN-C90310

Search information 
Request: 90310Match: SGN-C90310
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C90310Clone name: cLEW-20-O8
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: Alias clone SGN-C182587 is on microarray TOM1: SGN-S1-1-8.4.8.20
See unigene SGN-U578456 for alternative clones/ESTs which are mapped
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E299571Length: 579 bp (971 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E299571 [] (trimmed) GTTTTTTTTAAGAAAAAAGTATTTGATCAAACTCGTGAGTGAGTACAACTGTCATGTTACAGTCCCCAAAAAGGTATAAAAATCTAAAATAATCG
TAACCACAATAACTCGATAGTATATTATAATACTAAAATGACGTAAAACCTTTTACGCCAAAGGACACACCCCATGCTAATCTCAACAAATACTT
CCATGGGACAACATCTCCGGCAAACACGGACATACTCTAGAAATAAATAAAAAAATAGAGCGAAAACTGAAACTCACAGTAAAACCAAAAATAAT
AACTTCAATATTGAATAAATGGAACTGCAAACCATTAGGTACGGCAAATCAGCATCTTCAAAAGAGGAGAAATTAAATGCACCACATGGTCTTCA
TGAGAACTGTGAATTGTCATATATCATGAAAACATGCCTTACATCCACTCTAGTAGAAACAATCGGAACTCATGAGTAGCATCATAATATGCTTA
ATAAAACCCCAAGGGAGAAAATTTATCTGCTACAAGTTCTTTGAGTGCAGTATATCAGGAGAAGAATGACCAGGCTACCATACTGTGTTAATGAT
GCACACGAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E299571] SGN-U578456 Tomato 200607 Build 2 466 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T113833 [Download][View] Facility Assigned ID: TRDCZ88THB
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.941 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5