EST details — SGN-E460642
Search information |
Request: 460642 | Match: SGN-E460642 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C254303 | Clone name: cPRO-31-N10 |
| ||
Library Name: cPRO | Organism: Solanum tuberosum |
Tissue: roots
Development Stage: in vitro grown stem cuttings
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E460642 | Length: 621 bp (913 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E460642 [] (trimmed)
GCAGATGAAGGCGAGATTATCAGGAGGACACTTCCGTATGCTTAATGAAAAACTCTACACTTGCTCTGGAGATGAGGCGCTCAATTATTTCAAGG
AAAATCCGGAACTTTTTAATGTGGGTATCAGGAGCAAATGTTACATTGGCCAGAAAAACCTGTTAATATAATCACAAAATGGCTAAAGGATCATA
GCCCTTCATTAATTGTTGCTGACTTTGGCTGTGGAGATGCACGGCTGGCAAGAAGTGTGAAGAACAAAGTGTGGTCTTTGGATCTTGTTGCACAT
GATCCTTCAGTCATTGCTTGTGACATGTCAAATACCCCTCTAGAGGCCTCGTCAGTTGATGTGGCCATCTTTTGCCTTTCATTGATGGGAACCGA
TTATCCAAGCTTTCTTCAGGAAGCACTCAGAGTTCTTAAACCCAGGGGGTGGCTTTTGATAGCAGAAGTTAAAAGCAGGCTTGATCCAACTACAG
GAGGAGCAGACCCAAACAATTTTTTGAAAGCTATTTGTGAGCTTGGGTTTACCATCGAGTCNAAGGATTTCTCTAACAAATGTTTGTGCTGTTCT
ACTTTAAGAAAAAGGAAAACAGAATTCNNGTAACAAGAGATTATTGGCCTG
AAAATCCGGAACTTTTTAATGTGGGTATCAGGAGCAAATGTTACATTGGCCAGAAAAACCTGTTAATATAATCACAAAATGGCTAAAGGATCATA
GCCCTTCATTAATTGTTGCTGACTTTGGCTGTGGAGATGCACGGCTGGCAAGAAGTGTGAAGAACAAAGTGTGGTCTTTGGATCTTGTTGCACAT
GATCCTTCAGTCATTGCTTGTGACATGTCAAATACCCCTCTAGAGGCCTCGTCAGTTGATGTGGCCATCTTTTGCCTTTCATTGATGGGAACCGA
TTATCCAAGCTTTCTTCAGGAAGCACTCAGAGTTCTTAAACCCAGGGGGTGGCTTTTGATAGCAGAAGTTAAAAGCAGGCTTGATCCAACTACAG
GAGGAGCAGACCCAAACAATTTTTTGAAAGCTATTTGTGAGCTTGGGTTTACCATCGAGTCNAAGGATTTCTCTAACAAATGTTTGTGCTGTTCT
ACTTTAAGAAAAAGGAAAACAGAATTCNNGTAACAAGAGATTATTGGCCTG
Unigenes |
Current Unigene builds | |||||
[SGN-E460642] | SGN-U276115 | Solanum tuberosum | Build 4 | 5 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T246218 [Download][View] | Facility Assigned ID: PROET77TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.979 | Expected Error Rate: 0.0166 | Quality Trim Threshold: 14.5 |