EST details — SGN-E558000
Search information |
Request: 558000 | Match: SGN-E558000 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C335122 | Clone name: 16887 |
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Library Name: SWST | Organism: Solanum tuberosum |
Tissue: Stolon
Development Stage:
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E558000 | Length: 809 bp (1212 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E558000 [] (trimmed)
TTTACACCAGTGAGCTACTACACAAGGGAAAAAATGGCAGCTATTCAGCAAAGTCTTTCTACTTCAATCTCTTCATCCACCTCTACTTTTCTGGG
TCAGAACAAACTCCGTTTCAGGAATCAGAATGTGTCAATGCCAGGCAAAACCAGTGGTATTGTCAGATGTGTTGCAACACCCTCTACGGAGAAAA
CTTCTTACAAGACACAGGTCTCCCGCAATGAAAACTTAGCAAAGCTTCAAGCTGGTTATCTGTTTCCTGAGATCGCAAGAAGGAGATCTGCACAC
ATGTTGAAACATCCTGATGCTCAAATTATAAGCCTTGGAATTGGTGACACTACCGAGCCCATTCCTGAAGTCATAACTTCTGCCATGGCAAAGAG
AGCACATGAACTGTCAACATTAAATGGTTACAGTGGTTATGGTGCTGAGCAAGGAGAAAAACAACTTAGAGCCTCCATTGCTTCTACCTATTATG
CAAATGTTGGACTAGAAGAAGATGAGATCTTTGTTTCTGATGGTGCCAAAAGTGATATATCTCGACTTCAGGTTCTTTTTGGGTCTAATGTGAGT
ATGGCTGTGCAAGATCCATCATATCCGGCTTATGTGGACTCGAGTGTTATTATGGGTCAAACTGGTCAGTTTCAGAAGGATGTGGAGAAGTATGG
GAATATTGCATACATGAGATGTACTCCAGAAAAATGGGTTCCTTCCTGATTTATCCAGTGTTCCTCCGACAGACCTTATATTTTTCTGTTTCGCC
TAATAATCCAACTGGTTCGGTGGGCATCTAAGGAGCATTGACTAAATTG
TCAGAACAAACTCCGTTTCAGGAATCAGAATGTGTCAATGCCAGGCAAAACCAGTGGTATTGTCAGATGTGTTGCAACACCCTCTACGGAGAAAA
CTTCTTACAAGACACAGGTCTCCCGCAATGAAAACTTAGCAAAGCTTCAAGCTGGTTATCTGTTTCCTGAGATCGCAAGAAGGAGATCTGCACAC
ATGTTGAAACATCCTGATGCTCAAATTATAAGCCTTGGAATTGGTGACACTACCGAGCCCATTCCTGAAGTCATAACTTCTGCCATGGCAAAGAG
AGCACATGAACTGTCAACATTAAATGGTTACAGTGGTTATGGTGCTGAGCAAGGAGAAAAACAACTTAGAGCCTCCATTGCTTCTACCTATTATG
CAAATGTTGGACTAGAAGAAGATGAGATCTTTGTTTCTGATGGTGCCAAAAGTGATATATCTCGACTTCAGGTTCTTTTTGGGTCTAATGTGAGT
ATGGCTGTGCAAGATCCATCATATCCGGCTTATGTGGACTCGAGTGTTATTATGGGTCAAACTGGTCAGTTTCAGAAGGATGTGGAGAAGTATGG
GAATATTGCATACATGAGATGTACTCCAGAAAAATGGGTTCCTTCCTGATTTATCCAGTGTTCCTCCGACAGACCTTATATTTTTCTGTTTCGCC
TAATAATCCAACTGGTTCGGTGGGCATCTAAGGAGCATTGACTAAATTG
Unigenes |
Current Unigene builds | |||||
[SGN-E558000] | SGN-U274450 | Solanum tuberosum | Build 4 | 7 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T358997 [Download][View] | Facility Assigned ID: bf_swstxxxx_0011b02.t3m |
Submitter: Rebecca Griffiths | Sequencing Facility: GASF |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.971 | Expected Error Rate: 0.0118 | Quality Trim Threshold: 14.5 |