EST details — SGN-E235790

Search information 
Request: 235790Match: SGN-E235790
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C16120Clone name: cLED-15-E2
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C169167 [TUS-5-A5] Trace: SGN-T351017 EST: SGN-E550142 Direction: 5' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E235790Length: 489 bp (847 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E235790 [] (trimmed) CAGGTAAATTGCCGTCACCGTCTCCAGCCGAAGCTAAATCCGTTATACTTCGGCAACGCAATTCAGAGCATTCCGACTTACGTATCAGCAGGGGA
CGTATTATCGCACGATCTACGCTGGTGCGCTGAGCAATTGAACAAAAACGTAAAGGCACACGACGATGTTATGGTGAGGAAGTTCGTAGGGGATT
GGGAAAAGGATCCACGGTGTTTTCCGTTGGGAAATTTCGACGGAGCTATGCTAACCATGGGGAGTTCGCCGAGATTTCCAATGTACGAGAATGAT
TTCGGGTGGGGAAGGCCGGTTGCTGTTCGGAGTGGACGAGCGAATAAATTTGACGGGAAGATATCGGCGTTTCCGGGGAGAAAAGGAGGAGGAAG
TGTGGATTTGGAGGTGATTTTGTCACCGGAAACAATGGAAGGCCTTGAGTCATACACAGAATTCATGCAGAATGTTACTGGATTTTAAGAATTTG
TTAACACAATTCAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E235790] SGN-U565216 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T52363 [Download][View] Facility Assigned ID: TOVCF25THB
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0124 Quality Trim Threshold: 14.5