EST details — SGN-E238128
| Search information |
| Request: 238128 | Match: SGN-E238128 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C18146 | Clone name: cLED-22-D12 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C169464 [TUS-5-M14] | Trace: SGN-T350841 | EST: SGN-E549966 | Direction: 5' | Facility: Avesthagen |
| Clone: SGN-C169464 [TUS-5-M14] | Trace: SGN-T351141 | EST: SGN-E550266 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E238128 | Length: 555 bp (758 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E238128 [] (trimmed)
CAGGCAACAGCAACCAGACGCTGCCTCATCTCAATCTCAGGCGAGCATCTGCGAAAGCCAGCTCCGACCAGCAGCAATTCGACGATTCTCCTCTT
TTCCGACGAGGACGGACAACATACTCCTGCGAGCATTTCGAGGTATTGAGACAGATCTTTAACAGATCCGTCCAGGTAAGTTTCTTTTATTGATT
TCAACTTTTTTCTTATATATATTGTGAGTTATTTGGACCATCTTGTTGATTCTTAGAAAACTAGTCTAGGCTTTGATTTCTCCATCGTTGCTTGT
TTGTTCTTGTGGCGATCTTTTTTCAAATGAAGAGCACAAAATAAATTAGAGAGAATGCTTGCTTGCGGTGATCTTTTTTCAGTAGAGATTTTGTT
AATCTTCAATTAAGTGAACGAAGACAAATAAGAATAATCAACCTAAGAAAAAAATGAACAAAGCAGACAAATATATGCATACCACAAATCTATGA
AGCACAAGTGAATTTAGTAACCCTAACTTTTAAAAGATACATTTTCATACTAAACCTAAATGCAATTTGACAGCCCGCCT
TTCCGACGAGGACGGACAACATACTCCTGCGAGCATTTCGAGGTATTGAGACAGATCTTTAACAGATCCGTCCAGGTAAGTTTCTTTTATTGATT
TCAACTTTTTTCTTATATATATTGTGAGTTATTTGGACCATCTTGTTGATTCTTAGAAAACTAGTCTAGGCTTTGATTTCTCCATCGTTGCTTGT
TTGTTCTTGTGGCGATCTTTTTTCAAATGAAGAGCACAAAATAAATTAGAGAGAATGCTTGCTTGCGGTGATCTTTTTTCAGTAGAGATTTTGTT
AATCTTCAATTAAGTGAACGAAGACAAATAAGAATAATCAACCTAAGAAAAAAATGAACAAAGCAGACAAATATATGCATACCACAAATCTATGA
AGCACAAGTGAATTTAGTAACCCTAACTTTTAAAAGATACATTTTCATACTAAACCTAAATGCAATTTGACAGCCCGCCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E238128] | SGN-U597018 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T54194 [Download][View] | Facility Assigned ID: TOVDJ18TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.960 | Expected Error Rate: 0.0101 | Quality Trim Threshold: 14.5 |
Working
