EST details — SGN-E238347

Search information 
Request: 238347Match: SGN-E238347
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C16691Clone name: cLED-17-E24
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E238347Length: 645 bp (901 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E238347 [] (trimmed) GCTGGTGGGCATATTGTTACTACTACAGACTGCTACAGGAAGACACGTGTTTTTATTGAGACAATATTACCTAAAATGGGAATTACGGCCACAGT
TATTGATCCAGCAGATATGGGAGCTTTGGAGTTAGCATTAAATCAGAAGAAAGTGGATCTTTTCTTTACTGAGTCTCCAACAAATCCATTCCTGA
GATGTGTTGACATTGAGCTGGTTTCAAAGCTTTGCCGTGAAAAAGGAGCCTTGGTTTGCATAGATGGAACATTTGCAACTCCTCTTAACCAGAAG
GCCCTTGCTCTAGGGGCTGACCTTGTTGTGCACTCTGCTACAAAATTCCTTGGTGGGCACAACGATGTTCTTGCAGGTTGTATTAGTGGTCCTGA
AAAATTAGTTTCAGTAATCCGAAACTTGCATCATATCCTGGGTGGTGCTCTCAATCCTAAGTCTGATGCAATTTTCCCAACTGCCAGAATGCTGC
ATATCTTATCATCCGAGGCATGAAGACGCTGCATCTTCGTGTACAGCAACAAAATTCTACTGCATTGAGGATGGCCGAAATTTTAGAGGCTCATC
CCAAGGTGAAACACGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E238347] SGN-U592140 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T52789 [Download][View] Facility Assigned ID: TOVCN36TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5