EST details — SGN-E238609

Search information 
Request: 238609Match: SGN-E238609
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C16830Clone name: cLED-17-L2
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175806 is on microarray TOM1: SGN-S1-1-5.1.11.13
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E238609Length: 399 bp (975 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E238609 [] (trimmed) CAGATTTGACCCATCAATTTCAGTAAAAGGGGTCAAATTTCATTGAGCTGAAATTCTGACCTTCTTTGAAAGGTTCAGACATTTTGACTTTCTTT
AACAGACCTTACGTTTTCTTTATCGCCGACTTTATCTTAGATCTCCACTTCTTGATCTTCAAGATCCTTAATTAGCTCAGAAACATCAATAATCT
CAGCTTCGGGATCTCTTGTACGCTGCTCTGAACATTCTTCTTGGTATCTTTGTGGATCTGGATGCGAGTTGATGAAGAGTGACAGTGAAATTGGA
AATTTGATTCTGAAGACGGGACAGATTCTGATGCGTCATCTGTATCGGTAGATAGCGAGGGGGAAGACTCTGCTCATGAGTTGATAACTGTACAG
AATAGTGATATGGCATTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E238609] SGN-U587975 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T53051 [Download][View] Facility Assigned ID: TOVCP61TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0056 Quality Trim Threshold: 14.5