EST details — SGN-E239571
| Search information |
| Request: 239571 | Match: SGN-E239571 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C18422 | Clone name: cLED-23-E6 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C169189 [TUS-5-B3] | Trace: SGN-T350945 | EST: SGN-E550070 | Direction: 5' | Facility: Avesthagen |
| Clone: SGN-C169189 [TUS-5-B3] | Trace: SGN-T351021 | EST: SGN-E550146 | Direction: 5' | Facility: Avesthagen |
| Clone: SGN-C169189 [TUS-5-B3] | Trace: SGN-T351274 | EST: SGN-E550399 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E239571 | Length: 496 bp (843 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E239571 [] (trimmed)
CAGGCAAGATGGAAGGGTTTTGCAAGCCCTCATATGAAATTTTTCAGTTAAATTGCATACCTAGCTTCTCCCCTCCCTTCTCATTTTTGTTTTGC
CTTTTGATTTTAGATCTGTTTTGTCCATTTTTTTCATTCGACGAGTTTCAAATTTTCTTTATATATCAGTTTTGTTGTTTATGATGTGGTAACTT
TGCATGCATTAAATCTAAATTTGATTAGATGTTGTTGTTATGGTCGTTTACTCCTCTTCTTCTCCGATTTCCTTAATTGTAGCTTTCTTTTTCAA
CTTTTTCTCCTTTTGTTCTTGATGTGGGTGTTTTTTCAATTTGTTATTTTTTCACAAATAGGACTTTACAGGTACTTGGAGAAGAAACGAAAGGA
AAGAAGCAGGGAACATTGAGCATTATCAAGTACAACGAACTTAAATCTTGATTTTTTTTCTCGAAAAGACTTTCAACTGGAAGGATTAGCTATTA
GAGTTACCCTAATTTTACAAC
CTTTTGATTTTAGATCTGTTTTGTCCATTTTTTTCATTCGACGAGTTTCAAATTTTCTTTATATATCAGTTTTGTTGTTTATGATGTGGTAACTT
TGCATGCATTAAATCTAAATTTGATTAGATGTTGTTGTTATGGTCGTTTACTCCTCTTCTTCTCCGATTTCCTTAATTGTAGCTTTCTTTTTCAA
CTTTTTCTCCTTTTGTTCTTGATGTGGGTGTTTTTTCAATTTGTTATTTTTTCACAAATAGGACTTTACAGGTACTTGGAGAAGAAACGAAAGGA
AAGAAGCAGGGAACATTGAGCATTATCAAGTACAACGAACTTAAATCTTGATTTTTTTTCTCGAAAAGACTTTCAACTGGAAGGATTAGCTATTA
GAGTTACCCTAATTTTACAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E239571] | SGN-U582867 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T54536 [Download][View] | Facility Assigned ID: TOVDL27TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.914 | Expected Error Rate: 0.0076 | Quality Trim Threshold: 14.5 |
Working
