EST details — SGN-E240225

Search information 
Request: 240225Match: SGN-E240225
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C19144Clone name: cLED-25-M16
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C169433 [TUS-5-L7] Trace: SGN-T350932 EST: SGN-E550057 Direction: 5' Facility: Avesthagen
Clone: SGN-C169433 [TUS-5-L7] Trace: SGN-T351235 EST: SGN-E550360 Direction: 3' Facility: Avesthagen
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E240225Length: 545 bp (723 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E240225 [] (trimmed) GAGAATCTTCCCGGAGACTTTGATGATGTTCATTTCCCTTCTACATCTATGTTAAGAAGTGCAGACCCAGTGGAAACTTCAGAATTGAACTACAG
TAACCAAGCACAACAAAGTACTTGTCCGGCTGTGGTCAGGAGTGCTGGTGAAATGGGTGTTAGTAGCACAAATGATGAAGAAGTCGTGAATGCTG
ATACTGCCACTGCCAATGTGAGGGATGGCCCTAGCTTTGGAATCAGTGGAGGAAGTATTGGAATGGGTGCTAGTCATGAAGCTGAAATCCATGGG
ACAGATGCTTCAGTGCATAGAGCAGATAGCGTTGCTGGTGAGGTAGAAGCGGTTGCTGAAATTACTGAAAATCAGGGGCAAACAGGTGAATTTGC
TCCAGATCCAGGACTTATGGGTGACTATGTCCCTGAAGAGGTGGACCGTGGAGATCCTAATGGTGATAGTCAAGATCTGACGTCTCGTTCAGTGG
GAAGGGCTGATAGTGGCTCAAAAGTTGTTGGCTCTGCCAAAGCAGAATCCATTGGAAGTGGTGAAAAGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E240225] SGN-U602871 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T55016 [Download][View] Facility Assigned ID: TOVDT80TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0021 Quality Trim Threshold: 14.5