EST details — SGN-E240346

Search information 
Request: 240346Match: SGN-E240346
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C19000Clone name: cLED-25-E20
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C169391 [TUS-5-J13] Trace: SGN-T350811 EST: SGN-E549936 Direction: 5' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E240346Length: 604 bp (712 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E240346 [] (trimmed) AAATAAAGGTAGTTGAAATACTATTTATAATAGTTACTCTATATTACACATGCATATAGGAGCAATAAGTCCTTCCCAGCTAGAGTTTTGTTTTT
GTTCCCTTTTCTTAAGCTGTACATTATCCATTTGGTAAATAAAAACTTTAGTTTACCAAAAAAGAAAGTGCTTATGAAAATAAACAATGTCAAAC
AAGCTCTTATATAGTATAATACAATGAGGTTGTTTTTCAGCACTATGTACATTTCACTAAAATCTAGTTTCAACAGCTGCATTCACCCTCTTGCC
ATTCTTTAGTTTGTCCAGAAGCTATTCTTAGATATTTTACAATAAGAAAAGGATTCCTCCAAATTCTTAACTGCAGCACATGAGAACAGTAAATT
ATAGCAGCACATGAGAACAGTAAATTATAGCAGCACATGTGACATTTCAGCATGTAACCTTTACTGCCCCAATTTCATCAATCTTTTAGCTCGTG
TGCTTGTTTCTCTTGTGTTTGTTAACATCATTAAGATCCTCCTTGCCCTCATGCTNTTTTCTCTTTTCATGATGTTTCTTTGAAAGGTCAGCACC
AGAATCATGACGGCCAGNTTTATCTTTCTTTTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E240346] SGN-U596291 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T55137 [Download][View] Facility Assigned ID: TOVDT34TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.936 Expected Error Rate: 0.0086 Quality Trim Threshold: 14.5