EST details — SGN-E242800
| Search information |
| Request: 242800 | Match: SGN-E242800 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C21073 | Clone name: cLED-31-J1 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C169498 [TUS-5-N24] | Trace: SGN-T350858 | EST: SGN-E549983 | Direction: 5' | Facility: Avesthagen |
| Clone: SGN-C169498 [TUS-5-N24] | Trace: SGN-T351148 | EST: SGN-E550273 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E242800 | Length: 556 bp (908 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E242800 [] (trimmed)
GTGAGTGTGAGATTTGCAAATGCTATTTGAACTCTACATGGTCTTTAGAGTTCAAAAATCTTTGCGATTGGTACTCTTATCTACTCAAAAAATCA
CCCACTGGTACAATACATGTACACGTTCTTGGAAATGTCATTACATCAAATCCAAACAACGTTGAATACATGCTTAAAACAAATTTCGATAATTT
TCCTAAAGGAAAACAGTTTTCTACTATCCTCGGCGATTTATTAGGCCGAGGAATTTTCGCCGTAGACGGCGAAATGTGGAAGTTTCAACGGAAGA
TGGCAAGTTTAGAACTCGGACGCGTATCGATACGCTCGTACGCTTTCGATATCGTCAGTGACGAAATTAGAAACCGGTTGATTCCGCTTTTGGAA
AGTAATATCCATACTGTTTTGGACTTACAAGATGTTTTACGACGTTTTTCGTTCGATAGCATCTGTAAATTTTCATTTGGTATGGATCCTGGTTG
TTTGAAATTATCATTACCAGATTCAGATCTTCAAGAGTCATTTGATTTAGCTTCGAAATTGTCTGCTGAAAGAGCTATGAC
CCCACTGGTACAATACATGTACACGTTCTTGGAAATGTCATTACATCAAATCCAAACAACGTTGAATACATGCTTAAAACAAATTTCGATAATTT
TCCTAAAGGAAAACAGTTTTCTACTATCCTCGGCGATTTATTAGGCCGAGGAATTTTCGCCGTAGACGGCGAAATGTGGAAGTTTCAACGGAAGA
TGGCAAGTTTAGAACTCGGACGCGTATCGATACGCTCGTACGCTTTCGATATCGTCAGTGACGAAATTAGAAACCGGTTGATTCCGCTTTTGGAA
AGTAATATCCATACTGTTTTGGACTTACAAGATGTTTTACGACGTTTTTCGTTCGATAGCATCTGTAAATTTTCATTTGGTATGGATCCTGGTTG
TTTGAAATTATCATTACCAGATTCAGATCTTCAAGAGTCATTTGATTTAGCTTCGAAATTGTCTGCTGAAAGAGCTATGAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E242800] | SGN-U567361 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T56719 [Download][View] | Facility Assigned ID: TOVES49TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0057 | Quality Trim Threshold: 14.5 |
Working
