Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E243977

Search information 
Request: 243977Match: SGN-E243977
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C24997Clone name: cLEE-1-E11
cartOrder Clone
Library Name: cLEEOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seeds and maturing carpels
Development Stage: 5 days post-anthesis to fruit over-ripe stage

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24997 [cLEE-1-E11] Trace: SGN-T58427 EST: SGN-E243978 Direction: 3' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E243977Length: 530 bp (773 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E243977 [] (trimmed) CACCAGATCACAATCCCTCAAAACTAATATTGCAAAATAAAATAAGTGATTAATAAAGTGATATAAAAAATTAAAAATTAAATTTTTACACTTGA
GTCAAGACTACTTAAATATTCATAAATATAATTCATTCACTCTTTTCGGTCTCAAATATTAGTCATTTAATAAATTGAACTTGTTTCAAAATATT
TGACTATTTAAGTATTCATGAATATAATAACAATGTTCCTTCAATTATTATCACGTTTTTCAATTTCAAATATTAGTCGTTTAACAAATTAAACT
CGTTTCAAAATATTTGACTACGTAAGTATTCTTCGTGAATATAATAGTGAACCATCATAATATTCATTCATTTATTGTCACTCTCTTCCGTCTCA
AATGTAAGTCGTTTGAAAAATTAAAACTTATTCCAAAATAATATTTGACTTTATAGACAAGCAAAAATAATTTAATTTACACGCTTTTTTCTAAA
TTAATTCATCCATAATTCTCTAATTAGTGAAGTATTAATTGATGAAGTGGGACAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E243977] SGN-U600589 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T58426 [Download][View] Facility Assigned ID: TSEAA30TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.868 Expected Error Rate: 0.0000 Quality Trim Threshold: 14.5