Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E246766

Search information 
Request: 246766Match: SGN-E246766
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C27759Clone name: cLEF-45-H10
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C180607 is on microarray TOM1: SGN-S1-1-4.1.19.15
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E246766Length: 549 bp (869 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E246766 [] (trimmed) GTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTAT
TACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTT
GTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTT
TAAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGC
CTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTT
CCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E246766] SGN-U594107 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T61501 [Download][View] Facility Assigned ID: TMGGX41TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0080 Quality Trim Threshold: 14.5