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EST details — SGN-E246770

Search information 
Request: 246770Match: SGN-E246770
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C27802Clone name: cLEF-45-J12
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176754 is on microarray TOM1: SGN-S1-1-1.1.9.13
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176754 [TUS-24-M8] Trace: SGN-T193100 EST: SGN-E391774 Direction: 5' Facility: INRA
Clone: SGN-C176754 [TUS-24-M8] Trace: SGN-T193346 EST: SGN-E392020 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E246770Length: 249 bp (861 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E246770 [] (trimmed) GTTTGGATTTGCAAACGTTGTTATCCATTCATAAGGAGGTGTCCCAAAGCTTATAACTCCGGAAATTAGGATTCGGCAAAGTAACCTGATGTACT
ACTAGCATCATACTTGCATTTTTGTGACTGATCATTCATTCCTATTTCTGGTTTTAGTTGAAGAGTCTTAAATTGCATATAAGTTTGCCTTTCAT
GGTGTACAACCTGTGGGAAGGAACAATGCTTAAAGGCTACTGGCTATAATGATAAAAGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E246770] SGN-U583676 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T61505 [Download][View] Facility Assigned ID: TMGGX54TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.946 Expected Error Rate: 0.0226 Quality Trim Threshold: 14.5