EST details — SGN-E247024
| Search information |
| Request: 247024 | Match: SGN-E247024 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C26859 | Clone name: cLEF-41-M24 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C169722 [TUS-6-H8] | Trace: SGN-T350666 | EST: SGN-E549791 | Direction: 5' | Facility: Avesthagen |
| Clone: SGN-C169722 [TUS-6-H8] | Trace: SGN-T351440 | EST: SGN-E550565 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E247024 | Length: 568 bp (1029 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247024 [] (trimmed)
GGACGAGCTGGGTTTTCTTGTTTGGGATCCTCGCAAGAATCCAAAAGACCGAACCCATCATATGCCAATTATTACTCCTGCTTACCCTTGCATGA
ACTCTAGCTACAATGTTTCCCCAAGTACTCTTCGAGTAATGATGGACCAATTTCAGTTTGGTAACAAGATTTGTGAGGAGATAGAGTTGAATAAA
GCACAGTGGGGCGCGCTTTTTAAGCATTATCTTTTCTTTGAGGTCTACAAAAACTATCTACAGGTTGACATTGTAGCAGCAGATAATGATGATTT
GCTAGCTTGGAAAGGCTGGGTGGAATCCCGGCTTAGGCAACTGACACTAAAGATAGAGCGGGACACGAACGGGATGTTGCAGTGCCATCCGTATC
CTAATGAATTTGTAGACTTATCTAAGCCATGTCCGCATTGTGCTTTTTTTACGGGCTTGCAGAGGAAACAGGGTGTCAAAGTGCAAGAAGGGCAA
CAATTTGATATTCGTGGCACAGTCGATGAGTTTAAGCAAGATGTAAGCATGTACGCTTACTGGAGACCAGGCATGGATATCTATGTATCTCAT
ACTCTAGCTACAATGTTTCCCCAAGTACTCTTCGAGTAATGATGGACCAATTTCAGTTTGGTAACAAGATTTGTGAGGAGATAGAGTTGAATAAA
GCACAGTGGGGCGCGCTTTTTAAGCATTATCTTTTCTTTGAGGTCTACAAAAACTATCTACAGGTTGACATTGTAGCAGCAGATAATGATGATTT
GCTAGCTTGGAAAGGCTGGGTGGAATCCCGGCTTAGGCAACTGACACTAAAGATAGAGCGGGACACGAACGGGATGTTGCAGTGCCATCCGTATC
CTAATGAATTTGTAGACTTATCTAAGCCATGTCCGCATTGTGCTTTTTTTACGGGCTTGCAGAGGAAACAGGGTGTCAAAGTGCAAGAAGGGCAA
CAATTTGATATTCGTGGCACAGTCGATGAGTTTAAGCAAGATGTAAGCATGTACGCTTACTGGAGACCAGGCATGGATATCTATGTATCTCAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247024] | SGN-U601919 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60439 [Download][View] | Facility Assigned ID: TMGGF84TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0074 | Quality Trim Threshold: 14.5 |
Working
