Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E247308

Search information 
Request: 247308Match: SGN-E247308
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C27991Clone name: cLEF-46-D5
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E247308Length: 554 bp (896 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E247308 [] (trimmed) TTAGGGCCGAGCTTAAATATTACACTTCACATGACCTTACCTCGGAACCCGACCTCATCGCCTTGTTACCGCCGTATTGGTGGTTACAATGTCGA
CTCCAGCTAGAAAGAGGCTGATGAGGGATTTCAAGATGTCTCTGCATAACCCTAAAATCTGGTATTAGTGGTGCACCTCAAGACAACAACATTAT
GCTTTGGAATAGCCGAGATATTTGGTCCTAATGACACTTCTTGGGATGGTGGTACGTTCAAGTTGACTCTTCAATTCTCTGAGGATTACCCCAAC
AAGCCACCAACAGTGCGGTTTGTTTCTCGCATGTTTCATCCTAATATTTATGCAGATGGAAGTATATGTTTGGATATTCTTCAGAATCAATGGAG
TCCAATTTATGATGTTGCGGCAATACTTACATCCATTCAGTCATTGCTGTGTGATCCAAACCCCAACTCACCTGCAAACTCGGAAGCAGCTCGGA
TGTTCAGTGAGAATAAAAAGGAGTACAATCGCAGAGTGAGAGAAATTGTTGAGCAGAGCTGGACTGCTGACTGATTCTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E247308] SGN-U593694 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T61719 [Download][View] Facility Assigned ID: TMGHA15TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0142 Quality Trim Threshold: 14.5