Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E253411

Search information 
Request: 253411Match: SGN-E253411
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C32990Clone name: cLEG-24-O10
cartOrder Clone
Library Name: cLEGOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: breaker fruit

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C188115 [TUS-54-F17] Trace: SGN-T352321 EST: SGN-E551446 Direction: 5' Facility: Giovanni
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E253411Length: 356 bp (957 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E253411 [] (trimmed) CTTGAGAGAACCCCTTTTTGTATTCTTTAGCTTTCTCTCTCTAGAAGAATTTCTCTTTTTTCCCCTCTGGCTGTCTGAAGCATAGCCGATCTACA
AGCTAGTCTTCTCCTTCAGAAACAACTTAAGGATCTCTGTAAACACCCAGTTGATGGATTTTCGGCTGGTTTGGTTGATGAAAGCAACTTGTTTG
AATGGAGTGTCACCATTATTGGACCTCAAGATACTTTATATGAAGGGGGTTTCTTTAATGCTATCATGAGCTTTCCTGAAAATTATGCCAACAGT
CCTCCAACTGTAAGGTTTACCACACAGATCTGGCATCCAAATGTTTACTCTGATGGGAGGGATTGCGTGTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E253411] SGN-U590154 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T67659 [Download][View] Facility Assigned ID: TBFDP89TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0158 Quality Trim Threshold: 14.5