EST details — SGN-E257420
| Search information |
| Request: 257420 | Match: SGN-E257420 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C38449 | Clone name: cLEG-45-M4 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C38449 [cLEG-45-M4] | Trace: SGN-T73099 | EST: SGN-E257419 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E257420 | Length: 721 bp (865 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E257420 [] (trimmed)
AGGAAATCAAACAAATCCATTCACTAGAAAACTCATTATTTATTACACCACTTAAAAAAGCAACATTTTACAAGGTAATTCAACAGAAGATTGCG
AGGAAAGTCCAAAACACACATGATCATTTTGGAAATCACAATACATCCTTCTTTACATCACACGAGATTGGTAAAATATATTTTGACTTTTGCTC
TTTTTTTTAACTCGATCCATTTATAATATCACACTAAATTTATTGTTATTATGCACGATATATGATAAGATGACACAACACTTATACCAAATATG
GAAATTCCACGAATATTAAAAATGTAACTAAAATAACAATTTAGAAGAGATGGTGGTGTCCCCCCTCAGCTTTTTTTTCTTCTTATTAATCCAAA
ACCATTATGGCTGCCAAAAATTCAGAGATGAAGTTTGCTATCTTCTTCGTTGTTCTTTTGACGACCACTTTAGTTGATATGTCTGGAATTTCGAA
AATGCAAGTGATGGCTCTTCGAGACATACCCCCACAAGAAACATTGCTGAAAATGAAGCTACTTCCCACAAATATTTTGGGACTTTGTAACGAAC
CTTGCAGCTCAAACTCTGATTGCATCGGAATTACCCTTTGCCAATTTTGTAAGGAGAAGACGGACCAGTATGGTTTAACATACCGTACATGCAAC
CTGTTGCCTTGAACAATATCAATGATCTATCGATCGATCTATCTATCTATTTATCT
AGGAAAGTCCAAAACACACATGATCATTTTGGAAATCACAATACATCCTTCTTTACATCACACGAGATTGGTAAAATATATTTTGACTTTTGCTC
TTTTTTTTAACTCGATCCATTTATAATATCACACTAAATTTATTGTTATTATGCACGATATATGATAAGATGACACAACACTTATACCAAATATG
GAAATTCCACGAATATTAAAAATGTAACTAAAATAACAATTTAGAAGAGATGGTGGTGTCCCCCCTCAGCTTTTTTTTCTTCTTATTAATCCAAA
ACCATTATGGCTGCCAAAAATTCAGAGATGAAGTTTGCTATCTTCTTCGTTGTTCTTTTGACGACCACTTTAGTTGATATGTCTGGAATTTCGAA
AATGCAAGTGATGGCTCTTCGAGACATACCCCCACAAGAAACATTGCTGAAAATGAAGCTACTTCCCACAAATATTTTGGGACTTTGTAACGAAC
CTTGCAGCTCAAACTCTGATTGCATCGGAATTACCCTTTGCCAATTTTGTAAGGAGAAGACGGACCAGTATGGTTTAACATACCGTACATGCAAC
CTGTTGCCTTGAACAATATCAATGATCTATCGATCGATCTATCTATCTATTTATCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E257420] | SGN-U579666 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T73100 [Download][View] | Facility Assigned ID: TBFGV74TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.941 | Expected Error Rate: 0.0020 | Quality Trim Threshold: 14.5 |
Working
