EST details — SGN-E259514
| Search information |
| Request: 259514 | Match: SGN-E259514 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C37666 | Clone name: cLEG-42-M10 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177553 is on microarray TOM1: SGN-S1-1-2.2.6.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177553 [TUS-26-N15] | Trace: SGN-T182521 | EST: SGN-E369907 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177553 [TUS-26-N15] | Trace: SGN-T182522 | EST: SGN-E369908 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259514 | Length: 686 bp (921 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259514 [] (trimmed)
GTTGGGCTGTACATAATTTGTTAATGTAAGAAGCCCAGAAAGTTAACAATCTAGTCCCTTTAGGTTTCAGGTTTTCCTGTCCAAAAGAGGCAAAG
ACTAAGATTTTCTCATGAAAACTCACAGATTCCTTAATTGTTGATCGGAGAAATTAAAATCAGGTTTAATTAATGGCCGGAGATTATAGTCGATG
GTCGCCGGAGCCGCGGGATTTCAAAGCTATGTTGAAGAAATTATCACATGAACAACTTCTTCAAGTTTTGTCTGAAGGCCTTTGTTCTTACTGTG
AAGAAGTTATTGAGTCTCGTGTCAACAATCTCAACTTTATTCAAAGTAAGCTAATTTCAATTATTCTGTTTTTTTTCTGCGTATTTAATTTCACG
GTAATTTTGAAGTAAACATATACGAAGAAATCGAATTCGTTGTAGGTGTCTTGAATAGAAATTGAATTTGTGAATAAATTTGAGTTGAAATTAGT
ATATATAAGGATTTTTTTAGATACAAAACTCATTCCTGAGAGATCCTGAATCCGAATTGAATTTATGGATTATTCGATTTTAAAGTGTAGATACG
GATTTTTTCAGATAGAGATATTGGAGAAAGATACCCACTTTTGAGTTCGGGATTGAATTTCTGAATATTTAGATTTTTAAGTATCGATTCGGAGT
AGGGGTTTGCTTTTTGGGTCG
ACTAAGATTTTCTCATGAAAACTCACAGATTCCTTAATTGTTGATCGGAGAAATTAAAATCAGGTTTAATTAATGGCCGGAGATTATAGTCGATG
GTCGCCGGAGCCGCGGGATTTCAAAGCTATGTTGAAGAAATTATCACATGAACAACTTCTTCAAGTTTTGTCTGAAGGCCTTTGTTCTTACTGTG
AAGAAGTTATTGAGTCTCGTGTCAACAATCTCAACTTTATTCAAAGTAAGCTAATTTCAATTATTCTGTTTTTTTTCTGCGTATTTAATTTCACG
GTAATTTTGAAGTAAACATATACGAAGAAATCGAATTCGTTGTAGGTGTCTTGAATAGAAATTGAATTTGTGAATAAATTTGAGTTGAAATTAGT
ATATATAAGGATTTTTTTAGATACAAAACTCATTCCTGAGAGATCCTGAATCCGAATTGAATTTATGGATTATTCGATTTTAAAGTGTAGATACG
GATTTTTTCAGATAGAGATATTGGAGAAAGATACCCACTTTTGAGTTCGGGATTGAATTTCTGAATATTTAGATTTTTAAGTATCGATTCGGAGT
AGGGGTTTGCTTTTTGGGTCG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259514] | SGN-U576788 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72275 [Download][View] | Facility Assigned ID: TBFGJ77TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.940 | Expected Error Rate: 0.0037 | Quality Trim Threshold: 14.5 |
Working
