EST details — SGN-E265826
| Search information |
| Request: 265826 | Match: SGN-E265826 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C46073 | Clone name: cLEI-11-C20 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C189047 [TUS-56-M13] | Trace: SGN-T338801 | EST: SGN-E537926 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C189047 [TUS-56-M13] | Trace: SGN-T338803 | EST: SGN-E537928 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E265826 | Length: 598 bp (876 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E265826 [] (trimmed)
CAAATTCAATTTCTGAATAGAAGTGTTCCTTTTCTTCTTTTTCCTTTTTGGGTGAAACTGTAAGTGTTTTTGATGTACGTCTTGGTTGTCTTTCA
GTACTTGTTTAGAATACTTTTTGGATTTTTATCAGTTTGCTTCTCATCCAGAACCCTTGCACAATCCATGTGGGACAATTATACAACTAAGCACC
TCCTCTCTCATGTAACTATATTTGATCGTTTCAATTTGTTAGACCTACTTTCCTTTTTAGTCTATTTAAAAAAGAATGACTTTTTTAGCCACTCT
TCAGGTTCAATCTCCCCCCATGTCATGTCTAAGACCACGTTATTAAAGGACATTGTGGTACATTTGACATATCTTTAATATAAGACCAGAAGATT
TCAAAAGCCTTCTTTACTTTTTTAAACTCCGTGTCAAGACAAAATAGGACAAAAAATTTGAAACGAATGGAGTACTAATCACAGGAATGTCCTTC
ACCAAATATTTGGCTCTATTATCATGTAAAAAGAATTTGAGTATCCAATTCAGAACCCCACGTCAATGGGTGGAGTAGTTCAAGACCTTTATAAG
CTGCTCTGAAAGCCCTTTAACAACCCAT
GTACTTGTTTAGAATACTTTTTGGATTTTTATCAGTTTGCTTCTCATCCAGAACCCTTGCACAATCCATGTGGGACAATTATACAACTAAGCACC
TCCTCTCTCATGTAACTATATTTGATCGTTTCAATTTGTTAGACCTACTTTCCTTTTTAGTCTATTTAAAAAAGAATGACTTTTTTAGCCACTCT
TCAGGTTCAATCTCCCCCCATGTCATGTCTAAGACCACGTTATTAAAGGACATTGTGGTACATTTGACATATCTTTAATATAAGACCAGAAGATT
TCAAAAGCCTTCTTTACTTTTTTAAACTCCGTGTCAAGACAAAATAGGACAAAAAATTTGAAACGAATGGAGTACTAATCACAGGAATGTCCTTC
ACCAAATATTTGGCTCTATTATCATGTAAAAAGAATTTGAGTATCCAATTCAGAACCCCACGTCAATGGGTGGAGTAGTTCAAGACCTTTATAAG
CTGCTCTGAAAGCCCTTTAACAACCCAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E265826] | SGN-U572490 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T81981 [Download][View] | Facility Assigned ID: TGSBP22TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.945 | Expected Error Rate: 0.0256 | Quality Trim Threshold: 14.5 |
Working
