Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E266974

Search information 
Request: 266974Match: SGN-E266974
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C49108Clone name: cLEI-7-B22
cartOrder Clone
Library Name: cLEIOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: whole seedlings
Development Stage: germinating seed

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C188925 [TUS-56-H11] Trace: SGN-T338594 EST: SGN-E537719 Direction: 5' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E266974Length: 528 bp (833 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E266974 [] (trimmed) GCAACTTGACATGCTAAGACACCAAGCAGTCAACATAGTGGCAATGCGGCTGGGACGAGCAGAACCCCCTTTGAGGAAGGAGGTGGTTGAGTACA
TGTCTGATGTAGACTCACACCTATGGAGCATGAGACGTAGCAAGGCAAATTTTTTCCGCCTGATGTCAATTTTCACGGGATTATTTGCAGCAGGC
AAATGGTTCGGAGATATCTGCATGTGGAAGAACCCGATCACAACAGTCCTTGTGCACGTTCTCTTCCTTATGCTCGTCTCATTTCCTGAGCTTAT
TTTACCAACTGTTTTCCTTTACATGTTTCTAATAGGAGTGTGGAATTACCGTTACCGGCCTAGGTACCCTCCTCACATGAACACAAAGTTATCAC
AAGCTGAGTCAGTGCATCCCGATGAGCTAGACGAAGAGTTTGACACATTCCCAACTAGTCGCAGCCCTGAACTTGTGAGAATGAGGTATGATCGT
CTAAGGAGCGTGGCACGACGGATTCAAACAGTTGTTGGTGACGTTGCAACACA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E266974] SGN-U604842 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T81199 [Download][View] Facility Assigned ID: TGSBB11TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.988 Expected Error Rate: 0.0060 Quality Trim Threshold: 14.5