EST details — SGN-E271460

Search information 
Request: 271460Match: SGN-E271460
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C64090Clone name: cLEM-5-B22
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C189326 [TUS-57-I4] Trace: SGN-T339239 EST: SGN-E538364 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C189326 [TUS-57-I4] Trace: SGN-T348919 EST: SGN-E548044 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E271460Length: 518 bp (621 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E271460 [] (trimmed) GCTTTTAAGAAAAGAAAAAGTAGTGAATCATGTGGAAGAGCATATGGCACGAGAGATTGTAAGTGCAAGTGAGAGAAATAGGAAGAAAGATTTGA
GCTAGAAAAGTTTTGAAGGTTGAAAATCATGGCGTCTGTAATTGGAGTTCATAACTTTGCTGCTTTGAAGGCTGTTTATGAAAGACCGTCGTTGC
GGTGGATTCTGCAACCCAAAATGCAGCTGCCATTTTCAGGTCGGAGAATGAATCTGCAATCTAAGACTTCTGATGAGATTGATCTATCGAGAATA
GTCTTTCTGCATTCACAAAGTACGGACAAGGTTGAAGGTTCACCATTTGATCATAAAGGGTTATTACAGAGTCGAGAATTATATCAGTATATTTT
GGAGACTAGTGTTTACCCAGGAGAACCTGCGCCTCTTAAAGAGATCAGGGCTATAACAGAAAATCATCCTTATTTTTTTATGGGTGCATCACCTG
ATTCAGGTCAACTGATAGCCATGCTGTTGGATATGTTAAATGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E271460] SGN-U594332 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T85265 [Download][View] Facility Assigned ID: TGFAT11TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.946 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5