EST details — SGN-E271936

Search information 
Request: 271936Match: SGN-E271936
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C65122Clone name: cLEM-8-G17
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C189339 [TUS-57-I17] Trace: SGN-T339253 EST: SGN-E538378 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E271936Length: 574 bp (841 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E271936 [] (trimmed) TCAATTCTTAGACATCAATGGCTGCCACCTTAGCTGACTGTGCTATTTCCAAGACTAATGATATTGACACACACAAATCATCCTTCTATGGCGCT
CCAATTTCATCACACACTCAACCGAGAATCTTTTAATCGACTGCACAAAACATGTCTGCTTCCATGTCTGCTGATGCTCCTCCTCCTTACGATCT
CGGAAGTACCAGTTTTAATCCGATTAAGGAATCGATTGTTGCTCGCGAAATGACTCGGAGGTATATGACGGATATGATTACTTATGCTGATACTG
ATGTTGTCATTGGTGGTGCTGGATCTGCTGGATTATCTTGCGCTTATGAACTCAGCAAGAACCCTAATGTTCATGTGGCTATTCTTGAGCAATCT
GTGAGCCCTGCTGGAGGTGCTTGGCTAGGTGGACAACTCTTCTCTGCTATGGTTGCGCGTAAGCCAGCACATCTTTTCTTGAACGAGCTAGGCAT
TGACTACGACGAGCAAGACAACTACGTGGTCATCAAACACGCTGCCTTGTTCACCTCAACCATCATGAGCAAGCTTTTGGCCAGGCCAAATGTGA
AGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E271936] SGN-U590421 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T85487 [Download][View] Facility Assigned ID: TGFBC45TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0282 Quality Trim Threshold: 14.5