EST details — SGN-E274434
Search information |
Request: 274434 | Match: SGN-E274434 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C67567 | Clone name: cLEN-19-I5 |
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Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C189618 [TUS-58-E8] | Trace: SGN-T339699 | EST: SGN-E538824 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C189618 [TUS-58-E8] | Trace: SGN-T348995 | EST: SGN-E548120 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E274434 | Length: 374 bp (747 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E274434 [] (trimmed)
ATTGTGAAGAAATGGCTCGTACTAAGCAGACAGCTCGTATAATCAACCGGTGGAAAGGCTTCAAGGAAGCAACTTGCTACAAAGGCTGCAAGGAA
GTCAGCCCCTACCACAGGAGGAGTGAAGAAGCCTGATCGCTACCGACCTGGAACTGTTGCTCTCCGTGAAATCCGAAAATATCAAAAGAGCACTG
AGCTTCTCATCCGGAAGATGCGCATTCCAAAGGCTTGTGCGTGAAATTGCTCAGGATTTTAAGACAGATCTGAGGTTTCAAAGTCATGCTGTGCT
TGCACTCCAAGAAGCCGCTGAAGCTGTATTTAGTTGGTCTCTTTGAGGACACCAACTTGTGTGCCATCCATGCTATTAGAGTCACCATA
GTCAGCCCCTACCACAGGAGGAGTGAAGAAGCCTGATCGCTACCGACCTGGAACTGTTGCTCTCCGTGAAATCCGAAAATATCAAAAGAGCACTG
AGCTTCTCATCCGGAAGATGCGCATTCCAAAGGCTTGTGCGTGAAATTGCTCAGGATTTTAAGACAGATCTGAGGTTTCAAAGTCATGCTGTGCT
TGCACTCCAAGAAGCCGCTGAAGCTGTATTTAGTTGGTCTCTTTGAGGACACCAACTTGTGTGCCATCCATGCTATTAGAGTCACCATA
Unigenes |
Current Unigene builds | |||||
[SGN-E274434] | SGN-U579782 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T91370 [Download][View] | Facility Assigned ID: TRRCU51TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.983 | Expected Error Rate: 0.0233 | Quality Trim Threshold: 14.5 |