EST details — SGN-E281972
| Search information |
| Request: 281972 | Match: SGN-E281972 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C77519 | Clone name: cLES-2-E20 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C183525 is on microarray TOM1: SGN-S1-1-6.3.1.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183525 [TUS-42-G11] | Trace: SGN-T196120 | EST: SGN-E394794 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183525 [TUS-42-G11] | Trace: SGN-T200241 | EST: SGN-E399152 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183525 [TUS-42-G11] | Trace: SGN-T200242 | EST: SGN-E399153 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E281972 | Length: 397 bp (609 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E281972 [] (trimmed)
TCTTTATAAGGACATAAAAAGTTGTGTTACAATTTATTTCAAAGTTAGCACCACGGAGCACACTAGCAAGCAGCCAATATGTCCTATGACCAATT
GCTACAACACTTGTGCTACTCACTATTTTTTTCGTAAACAAAATTCAACAAACTGTATAATAAGAAACAACATATAGTAGTAGTATAGTAACATT
GGTAAATGAACAGTTTCTAGACTCTAGTAGTACTATTTTTTTCAAATTCCCAACTGACTCTGCACTTCCAAAATAGTCTTAGCTGAATTCCTAAG
CTGTTCAATTTCTTCATCAGTAAGATGCACATTCGTCACGCCCAAAACTCCACTTCTACCAAGCTGTGCAGGCAAGCTCAAGAACACATCGCCAC
CATCAATGCCATAGAAC
GCTACAACACTTGTGCTACTCACTATTTTTTTCGTAAACAAAATTCAACAAACTGTATAATAAGAAACAACATATAGTAGTAGTATAGTAACATT
GGTAAATGAACAGTTTCTAGACTCTAGTAGTACTATTTTTTTCAAATTCCCAACTGACTCTGCACTTCCAAAATAGTCTTAGCTGAATTCCTAAG
CTGTTCAATTTCTTCATCAGTAAGATGCACATTCGTCACGCCCAAAACTCCACTTCTACCAAGCTGTGCAGGCAAGCTCAAGAACACATCGCCAC
CATCAATGCCATAGAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E281972] | SGN-U580703 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T97132 [Download][View] | Facility Assigned ID: TPSAF34TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.933 | Expected Error Rate: 0.0068 | Quality Trim Threshold: 14.5 |
Working
