EST details — SGN-E285847
| Search information |
| Request: 285847 | Match: SGN-E285847 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C78332 | Clone name: cLES-5-F20 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178951 is on microarray TOM1: SGN-S1-1-4.4.2.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178951 [TUS-30-H21] | Trace: SGN-T184773 | EST: SGN-E372333 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178951 [TUS-30-H21] | Trace: SGN-T184774 | EST: SGN-E372334 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E285847 | Length: 545 bp (911 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E285847 [] (trimmed)
TTTGCATCTCAGTTCCAGGAGAGTAATGTCTATGTGAGTGGACAACAGAGTGAAAGCTCAGGTGTGTGGATTAATGCGCACAATAGAGATTTATC
TAGTTTGCAAGCAAGTTCGTTTTATAATCTTCCTCAGGGTCAAGTGGCTCTAACACCCACTCAACCAGGTCATGGAACTTTTGCTGGTGTTTATC
ACCCAGCTCAACCAGTTACAGCATCAACTGTTCATCCACTTCTGCAGCAGTCCCAAACAATAGCTGGTCCAGTTGATATGGTTGGACCAACCGGC
AATGTTTATCAACGGCCTCAGCATGCACAGATGAACTGGCCAAGTAGTTATTGAGGAGCTATTCTTTTGTTCGCAAAGCATAAAACAAGAAGAGA
AAATTGTCATTGGAGTTTTTAGAGTTGCAACATGTTTTGATGTGGAGGAATGGTTCCAGCAAATGTTGGGAAGAAGTGTGCAGTCTAACTGTAAA
TTAAGAAGGGTGTGACATAGAAGAGAACTTCACCAAAGGTCTCTTCTTTGCTTGGACTGAGGATTTAAAT
TAGTTTGCAAGCAAGTTCGTTTTATAATCTTCCTCAGGGTCAAGTGGCTCTAACACCCACTCAACCAGGTCATGGAACTTTTGCTGGTGTTTATC
ACCCAGCTCAACCAGTTACAGCATCAACTGTTCATCCACTTCTGCAGCAGTCCCAAACAATAGCTGGTCCAGTTGATATGGTTGGACCAACCGGC
AATGTTTATCAACGGCCTCAGCATGCACAGATGAACTGGCCAAGTAGTTATTGAGGAGCTATTCTTTTGTTCGCAAAGCATAAAACAAGAAGAGA
AAATTGTCATTGGAGTTTTTAGAGTTGCAACATGTTTTGATGTGGAGGAATGGTTCCAGCAAATGTTGGGAAGAAGTGTGCAGTCTAACTGTAAA
TTAAGAAGGGTGTGACATAGAAGAGAACTTCACCAAAGGTCTCTTCTTTGCTTGGACTGAGGATTTAAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E285847] | SGN-U584970 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98330 [Download][View] | Facility Assigned ID: TPSAT34TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.953 | Expected Error Rate: 0.0052 | Quality Trim Threshold: 14.5 |
Working
