EST details — SGN-E287164
| Search information |
| Request: 287164 | Match: SGN-E287164 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C78682 | Clone name: cLES-6-H1 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C190231 [TUS-59-N21] | Trace: SGN-T340752 | EST: SGN-E539877 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C190231 [TUS-59-N21] | Trace: SGN-T340754 | EST: SGN-E539879 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E287164 | Length: 663 bp (857 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287164 [] (trimmed)
AAGCCTCTGTTGATGGCTATTAAGGGTCAGATCTATGATGTTTCTCAGAGCAGAATGTTTTATGGACCTGGGGGACCTTATGCATTGTTTGCTGG
AAAGGATGCTAGTAGAGCTCTTGCCAAGCTGTCCTTTGAGGAAAAAGATCTCACAGGGGATATTTCTGGCCTTGGTGCATTTGAGCTTGATGCCT
TGCAAGATTGGGAGTACAAATTCATGAGCAAATATGTCAAAGTTGGTACTGTGAAGCAGGCAGTGCCAGTAAATGATGGGCAAGCTAATGACGAA
ACTATTGAAGCAACTACTGATGGTGAAGCTAAGCCAGGCGAGGATGATGCTTCAGGGAGCGCCAAGCCATCGGAATATGATGGTCCGTCAAAAGG
TTCCGAGGCTGGTGCTGATGCCCCTTCAGAGACTGCTGCTGTTGAATCTGTAGTCAAATCTGAGGCTGATGTCGACAAGAAGGACTAATTGGGAC
AATTTTAGTTCAAGTGACAAGCTGAGAAGTGAGAACCAAACGGAACTGCTTTATGGAGATCTGAAATACATAGCATCTTGTGTCAAGATATAGTC
TAAACTGTTGTATGAAATAATGAACAAATCACATTTCACTTCCTGTTTCTTATAGTCTATAGAGGTGTTCTTTACTGAAGTAATGCTTGATTT
AAAGGATGCTAGTAGAGCTCTTGCCAAGCTGTCCTTTGAGGAAAAAGATCTCACAGGGGATATTTCTGGCCTTGGTGCATTTGAGCTTGATGCCT
TGCAAGATTGGGAGTACAAATTCATGAGCAAATATGTCAAAGTTGGTACTGTGAAGCAGGCAGTGCCAGTAAATGATGGGCAAGCTAATGACGAA
ACTATTGAAGCAACTACTGATGGTGAAGCTAAGCCAGGCGAGGATGATGCTTCAGGGAGCGCCAAGCCATCGGAATATGATGGTCCGTCAAAAGG
TTCCGAGGCTGGTGCTGATGCCCCTTCAGAGACTGCTGCTGTTGAATCTGTAGTCAAATCTGAGGCTGATGTCGACAAGAAGGACTAATTGGGAC
AATTTTAGTTCAAGTGACAAGCTGAGAAGTGAGAACCAAACGGAACTGCTTTATGGAGATCTGAAATACATAGCATCTTGTGTCAAGATATAGTC
TAAACTGTTGTATGAAATAATGAACAAATCACATTTCACTTCCTGTTTCTTATAGTCTATAGAGGTGTTCTTTACTGAAGTAATGCTTGATTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287164] | SGN-U579794 | Tomato 200607 | Build 2 | 44 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98616 [Download][View] | Facility Assigned ID: TPSAW37TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0050 | Quality Trim Threshold: 12.5 |
Working
