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EST details — SGN-E289171

Search information 
Request: 289171Match: SGN-E289171
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C76488Clone name: cLES-18-D12
cartOrder Clone
Library Name: cLESOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C190593 [TUS-60-M23] Trace: SGN-T341374 EST: SGN-E540499 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C190593 [TUS-60-M23] Trace: SGN-T341376 EST: SGN-E540501 Direction: 5' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E289171Length: 485 bp (960 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E289171 [] (trimmed) AGTAAATCCAAAATGTATTCAAGTAATCGCACGGAATAAAGAATCATACAAATAGGCTAACTATATACATACAGGTAAACCTAGATGTGTTTCAT
TAACTTGCTTGCATACATAATGTGATCCAATGGAGAGGTAGTAACAATGGGGACAACTAGCAAATCGAAACCCCTGTTGAGAATGACTCAAAATA
TACTGCGGAAGTAGAAAGATTAAAAAAACTATCATTGCCGGTAATAGCCACTCTGGTGGGGAGGGAACTTTTAGCGTCAATTGGTAGCACGACAT
CTAGGCAATTTCCTAAATCATCTGTAACGGCTGATTTTGAAGAGCAAAATTGTGTCCAAGTGATTGTTGGTTCTTTGTACTTGAAGGATGCGGAG
GAGGTTACTAAAGTTATTCCAAATGCAAAAGCAATTCAGCTTGACATTACGAGTCACGAGTCTCTTTCTAGCTGGATCGCAGAGGTTGATGTTGT
CATCAACTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E289171] SGN-U577473 Tomato 200607 Build 2 62 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T101613 [Download][View] Facility Assigned ID: TPSCT18TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0058 Quality Trim Threshold: 14.5