EST details — SGN-E290139
Search information |
Request: 290139 | Match: SGN-E290139 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C87718 | Clone name: cLET-5-J22 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C190698 [TUS-61-B8] | Trace: SGN-T341554 | EST: SGN-E540679 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C190698 [TUS-61-B8] | Trace: SGN-T341557 | EST: SGN-E540682 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E290139 | Length: 518 bp (643 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290139 [] (trimmed)
ATCAGGCCCAATTGCTAGTAGATCAAGCAATTTTTCATTGAGTTTTAGGGCCCATATTGAGCCCAATTCAAAAAATAATAGTAGTAGCACAACAA
GCCTTTTGATCCAACAAAAAGATTCAAGACAACAAGATCCATATGGTATTTTTGATTCAGAAGAGTCCATTCCAAGAGATATTGGGCCTTACAAA
AATTTGGTTAGATTTGCATCAACATCTATGGAGCCCAAATGCATCTCAAATTCTAACTCTATTCCTCTATTTCAAAAGCTCAAGCTTATGATGAA
CAGTCTACAAAATGTAGATTTAAGATTGCTGAATTATCAACAGAAATTAGCATTCTGGATCAACATGTACAACGCTTGTATCATGGATTTCTTCA
ACATGGACTTCCTTCTAGTTCTACTCCAGAAAAGTTATTGTCACTTATGAATAAGGCAACTCTGAATATTGGTGGAAATACAATAAATGCACATG
CAATTGAACATTTTATTTTGAGAAAACCAGTAAATTCACTAGC
GCCTTTTGATCCAACAAAAAGATTCAAGACAACAAGATCCATATGGTATTTTTGATTCAGAAGAGTCCATTCCAAGAGATATTGGGCCTTACAAA
AATTTGGTTAGATTTGCATCAACATCTATGGAGCCCAAATGCATCTCAAATTCTAACTCTATTCCTCTATTTCAAAAGCTCAAGCTTATGATGAA
CAGTCTACAAAATGTAGATTTAAGATTGCTGAATTATCAACAGAAATTAGCATTCTGGATCAACATGTACAACGCTTGTATCATGGATTTCTTCA
ACATGGACTTCCTTCTAGTTCTACTCCAGAAAAGTTATTGTCACTTATGAATAAGGCAACTCTGAATATTGGTGGAAATACAATAAATGCACATG
CAATTGAACATTTTATTTTGAGAAAACCAGTAAATTCACTAGC
Unigenes |
Current Unigene builds | |||||
[SGN-E290139] | SGN-U598103 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T103587 [Download][View] | Facility Assigned ID: TMEAT59TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.933 | Expected Error Rate: 0.0005 | Quality Trim Threshold: 14.5 |