EST details — SGN-E297556

Search information 
Request: 297556Match: SGN-E297556
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C84375Clone name: cLET-28-I9
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C191114 [TUS-62-C16] Trace: SGN-T342269 EST: SGN-E541394 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C191114 [TUS-62-C16] Trace: SGN-T342271 EST: SGN-E541396 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E297556Length: 519 bp (899 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E297556 [] (trimmed) AGTGGCTGTAGCACTCTTGGGGAGTATTTCCTTTTCCTTCTCCATGCCTTCTATATCTTCCCCTTCTCTCCAACACCCTTTCAACTTCAACAAGC
ACAAACCTCTAATTGTGGCTGCAATGAGTGATGATCCAGTTCGTGAATGGATCCTTTCAGAAGGAAAGGCAACAAAGATCAAAGGAATCAGTCCA
ATTGGTGGTGGGTGCATAAATCGGGCAACTCGTTATGACACTGATGCTGGTTCGTTTTTTGTTAAAACAAACAGGAGTATTGGACCATCAATGTT
TGAGGGAGAGGCATTGAGTTTAAATGCTATGTACGAAACAAGGTCAATCCGTGTACCAAAACCATATAAAGTTGGATCTCTGCCAACTGGTGGCT
CGTATATCATTATGGAATTTATTGAGTTTGGGGCATCTAGAGGCAATCAGTCTGCATTAAGAAGGAAACTTGCTGAAATGCACAAAGCGGCAAAA
TCTGAAAAGGGGTTTGGCTTTCACGTTGACAATACTATTGGCAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E297556] SGN-U564697 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T109350 [Download][View] Facility Assigned ID: TMEEE53TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0229 Quality Trim Threshold: 14.5