EST details — SGN-E299765
| Search information |
| Request: 299765 | Match: SGN-E299765 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C90176 | Clone name: cLEW-1-P2 |
| ||
| Library Name: cLEW | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C191358 [TUS-62-M20] | Trace: SGN-T342688 | EST: SGN-E541813 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C191358 [TUS-62-M20] | Trace: SGN-T342690 | EST: SGN-E541815 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E299765 | Length: 552 bp (896 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E299765 [] (trimmed)
GAAGTAATATTACTGATTGTGGTTCTTTCAACATGTTTTTCTGTTTATGGACAAGATATGCTCACTGATCCAGATGAAGTGACGGCGCTAGAGGC
CATTCATGGAAGCCTGGAAGATCCGATGGGTTATCTCAGAAATTGGGAAAAGGAGAAAGACCCTTGCACTTCTTGGTCATTTGTTCATTGCCTTC
AAAACGAAACCGACGGTTACCAGCATGTTCAAGAATTGCGTCTGATGAATTTGTCCCTATCTGGTACACTAGCTCCTGAGCTTGGCCAACTTAAA
CATATGGAGATTTTGAATTTCATGTGGAACAGAATTAGTGGCAGTATACCTAAGGAGATAGGAAGCATTACTGCTCTGAGGCTACTGCTTTTGAG
TGGAAATCAAATATCAGGTTCTTTACCAGAAGAGCTCGGTTATCTTCCTAACTTAAACAAATTTCAGTTGGACTTAAATGATATATCAGGACCAA
TACCAAAATCGTTTGCAAACTTGCCAAAAGTTGCACATTTCCATATGAATAACAATTCAATAAGCGGTCAAATTCCT
CATTCATGGAAGCCTGGAAGATCCGATGGGTTATCTCAGAAATTGGGAAAAGGAGAAAGACCCTTGCACTTCTTGGTCATTTGTTCATTGCCTTC
AAAACGAAACCGACGGTTACCAGCATGTTCAAGAATTGCGTCTGATGAATTTGTCCCTATCTGGTACACTAGCTCCTGAGCTTGGCCAACTTAAA
CATATGGAGATTTTGAATTTCATGTGGAACAGAATTAGTGGCAGTATACCTAAGGAGATAGGAAGCATTACTGCTCTGAGGCTACTGCTTTTGAG
TGGAAATCAAATATCAGGTTCTTTACCAGAAGAGCTCGGTTATCTTCCTAACTTAAACAAATTTCAGTTGGACTTAAATGATATATCAGGACCAA
TACCAAAATCGTTTGCAAACTTGCCAAAAGTTGCACATTTCCATATGAATAACAATTCAATAAGCGGTCAAATTCCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E299765] | SGN-U603889 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T111995 [Download][View] | Facility Assigned ID: TRDAD85THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0012 | Quality Trim Threshold: 14.5 |
Working
