EST details — SGN-E301377

Search information 
Request: 301377Match: SGN-E301377
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C90774Clone name: cLEW-24-B12
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C191893 [TUS-64-D3] Trace: SGN-T343613 EST: SGN-E542738 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C191893 [TUS-64-D3] Trace: SGN-T349638 EST: SGN-E548763 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E301377Length: 410 bp (830 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E301377 [] (trimmed) GGTTTTACTTCTGGATTAGATGCGGGATTCATAACTAGGTTTGGATCCCAGCGTTCTGAGTATTGGCGAACTCTTTACTCCTCAGTTGTAAGTTT
CAACTAGCTGGAAGTCATTTTGGAAGTCCTAATATGTTATCCCTCCTAGTTGATTTATCCTGTTCCCCTGCAGAGTTTTGGGGCCCCTTTTCTCG
TTTTGTGCTCAGAAAATGATGATATTGCACCATATCAATCTGTATGTAAATTTGCTCACAGCTTGCAAGACATGGGGGCAGATATCAAAATGATA
ATGTGGAAGAGTTCCTGTCACGTAGGCATGTACAAGAGTGATCCCATCCAGTACAGCATTGCTATAGATCAACTACTTGCTCATGCAACTTCAGT
TTTCTCTAGCAGAATTAGGAAACTAGGAGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E301377] SGN-U569772 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T114500 [Download][View] Facility Assigned ID: TRDDR06TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0052 Quality Trim Threshold: 14.5