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EST details — SGN-E301839

Search information 
Request: 301839Match: SGN-E301839
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C90954Clone name: cLEW-25-A3
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E301839Length: 364 bp (948 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E301839 [] (trimmed) ACTGCTCTTTATGTTGCAAACTTACTCCATGAGGCTGGTCTTACTCCAGGTGTTTTAAATATCGTTATCTGGTTTTGGACCTACCGCTGGTGCTG
CACTGGCTCTTCATATGGATGTATACAAGCTTGCTTTCACTGGATCAACGGAAACTGGACAAACAGTTATTCAACTGGCTGCCAAAAGCTATCTG
AAACCAGTTACCCTTGAACTAGGAGGGAAATCACCTTTCATTATATGTGAGGATGCTGACATTGATCATTCTGTTGAGCTAGCACATTTTGCACT
CTTAATTAATCAAGGCCAAAGTTGTTTTGCTGGTTCTAAAACATATGTACATGAACGAGTATATGATGAATTTGAAGAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E301839] SGN-U587995 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T114598 [Download][View] Facility Assigned ID: TRDDS02TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0335 Quality Trim Threshold: 14.5