EST details — SGN-E302371
| Search information |
| Request: 302371 | Match: SGN-E302371 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C91452 | Clone name: cLEW-27-K22 |
| ||
| Library Name: cLEW | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192049 [TUS-64-J15] | Trace: SGN-T343881 | EST: SGN-E543006 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192049 [TUS-64-J15] | Trace: SGN-T349682 | EST: SGN-E548807 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E302371 | Length: 576 bp (908 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E302371 [] (trimmed)
GCCAGTTCTTTCTTTTCAATTTCCCCAAACCCTAGAACTGGAAAATCTAAGTAAATGGGTCGTCTTGTTTCTTGATTTTAATATCTGGGTCGTTT
TTTTAGTTCTCGTTTTGCGTATCAGAATCTTCAAACAAGTTCATTTGCTGCAGAAAAAAGGAGCAATTTTTAATATTTTTATCTTCAATATTAGT
AGTTCATTCACATTGGTGGAAGTTGGTTTGTTGGCATTTGTTTTTTATGGTTTGAGTTGAAACGGGTCGGACTCGGTTCTCTATGGCTCGGCGTC
ATGGGTGGCAACTACCGGCTCACTCGTTTCAGGTTGTGGCTATAACAGTTTTCTGCCTGCTATCTGTTGGCTTCTATGCATTTTTTGCTCCATTT
CTAGGAAAAGACATCTTTGAGTACATAGCAATTGGTGTTTATTCCTTCCTGGCTCTATGTGTGTTCATACTCTATGTTAGATGCACAGCAATTGA
TCCTGCTGATCCTGGGATTCTCATTGAAGCTGACAAGTCAACGGCCTATCAATCACACAACGAAATAGAGTTGCCTGGTGATATATCTGCTGCAG
GGGGTC
TTTTAGTTCTCGTTTTGCGTATCAGAATCTTCAAACAAGTTCATTTGCTGCAGAAAAAAGGAGCAATTTTTAATATTTTTATCTTCAATATTAGT
AGTTCATTCACATTGGTGGAAGTTGGTTTGTTGGCATTTGTTTTTTATGGTTTGAGTTGAAACGGGTCGGACTCGGTTCTCTATGGCTCGGCGTC
ATGGGTGGCAACTACCGGCTCACTCGTTTCAGGTTGTGGCTATAACAGTTTTCTGCCTGCTATCTGTTGGCTTCTATGCATTTTTTGCTCCATTT
CTAGGAAAAGACATCTTTGAGTACATAGCAATTGGTGTTTATTCCTTCCTGGCTCTATGTGTGTTCATACTCTATGTTAGATGCACAGCAATTGA
TCCTGCTGATCCTGGGATTCTCATTGAAGCTGACAAGTCAACGGCCTATCAATCACACAACGAAATAGAGTTGCCTGGTGATATATCTGCTGCAG
GGGGTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E302371] | SGN-U602677 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T114954 [Download][View] | Facility Assigned ID: TRDEB71TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.958 | Expected Error Rate: 0.0074 | Quality Trim Threshold: 14.5 |
Working
