EST details — SGN-E306804
| Search information |
| Request: 306804 | Match: SGN-E306804 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C95239 | Clone name: cLEY-11-C10 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192708 [TUS-66-F2] | Trace: SGN-T345013 | EST: SGN-E544138 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192708 [TUS-66-F2] | Trace: SGN-T349868 | EST: SGN-E548993 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E306804 | Length: 565 bp (850 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E306804 [] (trimmed)
GCAACAATGGCGGCAGAGGGAACAAAAGTGGGAAGAATCAAATTGGGTTCAGAGGGTCTTGAAGTATCTGCTCAAGGACTTGGTTGTATGGGTAT
GTCCGCTTTTTACGGGCCTCCCAAACCCGATTCCGATATGGTCCAACTCATCCACCACGCCATTAACTCCGGCGTCACATTTCTCGATACTTCCG
ATGTATATGGGCCCCACACTAATGAAATCCTCCTCGGCAAGGCTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTA
AGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCAT
AGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAAT
ATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTAT
GTCCGCTTTTTACGGGCCTCCCAAACCCGATTCCGATATGGTCCAACTCATCCACCACGCCATTAACTCCGGCGTCACATTTCTCGATACTTCCG
ATGTATATGGGCCCCACACTAATGAAATCCTCCTCGGCAAGGCTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTA
AGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCAT
AGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAAT
ATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E306804] | SGN-U571240 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T118728 [Download][View] | Facility Assigned ID: TRYBP17TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.989 | Expected Error Rate: 0.0047 | Quality Trim Threshold: 14.5 |
Working
