EST details — SGN-E308416
| Search information |
| Request: 308416 | Match: SGN-E308416 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C98004 | Clone name: cLEY-25-F13 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193237 [TUS-67-L3] | Trace: SGN-T345921 | EST: SGN-E545046 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193237 [TUS-67-L3] | Trace: SGN-T345922 | EST: SGN-E545047 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E308416 | Length: 507 bp (1068 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E308416 [] (trimmed)
GCATCTTCAGCCGTCCACAAAAGCTACCAACTCGTTCCTCCGGCTTCAACACTACACCTTCATTCCTCCGCAAATTGCAAGAACACGTCCCTAAT
TCTACCCAACTCGTCGGATTTCTAACCCTAATTATCTCCGGCGGGATCTTACTCCTCCTCACCGGACTCACACTTACCACAATTATATTAGGTTT
AATCTTCTTCACTCCTTTGGTTGTAATCTCCAGCCCGATTTGGGTCCCTGTGGGTACTGTTCTGTTTATAGCCATTGCCGGATTTTTATCGGTTT
GAGGATTTGGGGTTGCCACGCTGGCGTCTCTATCTTGGTTATATAGGTACATTAGGGGATTTCACCCGCCCGGTTCGGACCGGGTTGATTACGCC
TGAAGCCGAATTGCTGATACGGCTAGCCATGTCAAAGATTACGCTAGAGAATACGGCGGGTATCTACATAGTAAAGAGAAGGATGCAGCTCCTGG
TGCTTGAGCTGGATCAAGCCGTTTTTTCAGTT
TCTACCCAACTCGTCGGATTTCTAACCCTAATTATCTCCGGCGGGATCTTACTCCTCCTCACCGGACTCACACTTACCACAATTATATTAGGTTT
AATCTTCTTCACTCCTTTGGTTGTAATCTCCAGCCCGATTTGGGTCCCTGTGGGTACTGTTCTGTTTATAGCCATTGCCGGATTTTTATCGGTTT
GAGGATTTGGGGTTGCCACGCTGGCGTCTCTATCTTGGTTATATAGGTACATTAGGGGATTTCACCCGCCCGGTTCGGACCGGGTTGATTACGCC
TGAAGCCGAATTGCTGATACGGCTAGCCATGTCAAAGATTACGCTAGAGAATACGGCGGGTATCTACATAGTAAAGAGAAGGATGCAGCTCCTGG
TGCTTGAGCTGGATCAAGCCGTTTTTTCAGTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E308416] | SGN-U586600 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T121679 [Download][View] | Facility Assigned ID: TRYDU31TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0330 | Quality Trim Threshold: 12.5 |
Working
