EST details — SGN-E308513
| Search information |
| Request: 308513 | Match: SGN-E308513 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C97412 | Clone name: cLEY-21-H1 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193121 [TUS-67-G7] | Trace: SGN-T345722 | EST: SGN-E544847 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193121 [TUS-67-G7] | Trace: SGN-T345723 | EST: SGN-E544848 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E308513 | Length: 545 bp (979 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E308513 [] (trimmed)
GGGCAAGGGTACATAGCTATGGAAAGTGAGATGGGTAATATTAATGAAGCTAGATCTCTCTTTAAGAGATGCTACAGTAAACGGTTTCCCGGGAC
TGGCTCAGAGGACATATGCAATTCATGGATTCGCTTCAAGAGAGAGTATGGTACCCTGGACGATTTTGACCTTGCCGTTAAAAAGGTCACTCCTC
GCCTTGAAGAACTGCAGTTATTCAAACTACAAGAAGCTAAGAGCATCGGTGTGTCAGCAGATGATGGAAACAATTCTTCTAGGAAAAATGTGCGT
GAAAAGAGGAAGCCAGTATCTAATTTAATTGAAGAACAATCTCCTGCTAAACGTCACAAAGATAAAGCTAAAAATGTTAAAATCACTTCTGAAGA
TGGTAAAAGCATCTCAAAAGAACCGGTCAAGGTTAATGATAAAAAACCAGATGTGGCTGCTAGCAAGCCAGTGAGTGGAAGCAAAAAAGAGAACA
GAGATGTCACTTCAGGGAAACCACAACAGTATGATGACCAGTGTACTGCATTTGTATCTAACATTAACCT
TGGCTCAGAGGACATATGCAATTCATGGATTCGCTTCAAGAGAGAGTATGGTACCCTGGACGATTTTGACCTTGCCGTTAAAAAGGTCACTCCTC
GCCTTGAAGAACTGCAGTTATTCAAACTACAAGAAGCTAAGAGCATCGGTGTGTCAGCAGATGATGGAAACAATTCTTCTAGGAAAAATGTGCGT
GAAAAGAGGAAGCCAGTATCTAATTTAATTGAAGAACAATCTCCTGCTAAACGTCACAAAGATAAAGCTAAAAATGTTAAAATCACTTCTGAAGA
TGGTAAAAGCATCTCAAAAGAACCGGTCAAGGTTAATGATAAAAAACCAGATGTGGCTGCTAGCAAGCCAGTGAGTGGAAGCAAAAAAGAGAACA
GAGATGTCACTTCAGGGAAACCACAACAGTATGATGACCAGTGTACTGCATTTGTATCTAACATTAACCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E308513] | SGN-U597292 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T120812 [Download][View] | Facility Assigned ID: TRYDE37TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0259 | Quality Trim Threshold: 14.5 |
Working
