EST details — SGN-E308846
| Search information |
| Request: 308846 | Match: SGN-E308846 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C97754 | Clone name: cLEY-23-C13 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193190 [TUS-67-J4] | Trace: SGN-T345840 | EST: SGN-E544965 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193190 [TUS-67-J4] | Trace: SGN-T345841 | EST: SGN-E544966 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E308846 | Length: 659 bp (843 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E308846 [] (trimmed)
GTAACAGCAAGAGATGAGAAAAAAGGGAATGAAGCTGTTATTAATATGGATGAACACTCTAATTATAATATCATTTTTCATCAACTTGATGTGAC
TAACATTTCTAGTATTGTAACACTCAGAGATTTCATCAAGAATAGATTTGGCAAACTTGATATCTTGGTGAATAATGCGGCAATTCTTGGAGTGC
TTTTAGATAAAGATTTCATTATAAACCCACAACAAAATTTATTCATTGAGAAGATGAAAGTAGCAACTCAAACTATTGATATAGGTGAAGAATGC
ATAAAAACAAATTACTATGGTGCAAAATGGATGATACAAGAATTATTACCTCTACTTCAATTATCCGATTCGCCACGTATTGTCAATGTCTCCTC
CTCTACTGGAAAGCTCCAACATGTACGCAATGAATGGGCTATAGGAGTCTTGAATGATTGTGACAATCTAACAGAAGACAAAGTGGATGAGGTTT
TGAATGTTTTTCTCAAAGATTTCAAAGAGGATTTGTTAGAAAGCAAAAATTGGCCTCTAATAGTATCTGCTTATACACTATCAAAAGCAGCATTA
AATGGTTACACAAGAATATTGGCTAAGAAATATCCAAATTTTCTCATAAATTGTGTTTGTCCAGGTTATGTAAAAACTGATTTATGTTA
TAACATTTCTAGTATTGTAACACTCAGAGATTTCATCAAGAATAGATTTGGCAAACTTGATATCTTGGTGAATAATGCGGCAATTCTTGGAGTGC
TTTTAGATAAAGATTTCATTATAAACCCACAACAAAATTTATTCATTGAGAAGATGAAAGTAGCAACTCAAACTATTGATATAGGTGAAGAATGC
ATAAAAACAAATTACTATGGTGCAAAATGGATGATACAAGAATTATTACCTCTACTTCAATTATCCGATTCGCCACGTATTGTCAATGTCTCCTC
CTCTACTGGAAAGCTCCAACATGTACGCAATGAATGGGCTATAGGAGTCTTGAATGATTGTGACAATCTAACAGAAGACAAAGTGGATGAGGTTT
TGAATGTTTTTCTCAAAGATTTCAAAGAGGATTTGTTAGAAAGCAAAAATTGGCCTCTAATAGTATCTGCTTATACACTATCAAAAGCAGCATTA
AATGGTTACACAAGAATATTGGCTAAGAAATATCCAAATTTTCTCATAAATTGTGTTTGTCCAGGTTATGTAAAAACTGATTTATGTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E308846] | SGN-U573697 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T121139 [Download][View] | Facility Assigned ID: TRYDK19TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.936 | Expected Error Rate: 0.0095 | Quality Trim Threshold: 14.5 |
Working
