EST details — SGN-E309052
| Search information |
| Request: 309052 | Match: SGN-E309052 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C99936 | Clone name: cLEZ-1-G23 |
| ||
| Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193290 [TUS-67-N8] | Trace: SGN-T346012 | EST: SGN-E545137 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193290 [TUS-67-N8] | Trace: SGN-T346013 | EST: SGN-E545138 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E309052 | Length: 564 bp (906 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E309052 [] (trimmed)
GGATTCGTCTATTCATTTGAGTTATATTACGAAAGGAAGTGGACGTGTTGTAATTGTGGGACTGTTTGGCAAGGTTGTGTTGGATGCAAAAGTGG
AAGAAGGTGAACTGTTTTTTGTACCAAAATTTTTTCCATTTGTAGTGGAAGCTGATGAAGGAGGGATCGAATTTTTCTCCCTGAAAACATCGTCA
AAGCAAACGTACAGAGAATTATCGGGTGGGAAAAAATCAATTTGGGAAGCAGCATCTCCATCAATTTTAGAGGCTTCTCTTAATAGGACTCCAGA
TTTGACAAAGTCATTCAAGGCCAAGATTGCTAAGGGTGCTGTGATTTCCCCACCTTCAACTATTTAAGCAAAAAAAAAAAGAAATTCTATGCTTG
AAAATAACATCGACGGTGAAGTCGATATATTTGAACTATTTTACTTTATTTGAAGATCATATGGGAGTTTTTGGTGTTAGATTTTCTTGAATACA
AGCTTATAAAAGCTCTTTATGTGTGTATCATTGTGTGTGTATATGAATGTCATTCTTCCTAAGAATAAAAGAAAAATGAATTTGCTACG
AAGAAGGTGAACTGTTTTTTGTACCAAAATTTTTTCCATTTGTAGTGGAAGCTGATGAAGGAGGGATCGAATTTTTCTCCCTGAAAACATCGTCA
AAGCAAACGTACAGAGAATTATCGGGTGGGAAAAAATCAATTTGGGAAGCAGCATCTCCATCAATTTTAGAGGCTTCTCTTAATAGGACTCCAGA
TTTGACAAAGTCATTCAAGGCCAAGATTGCTAAGGGTGCTGTGATTTCCCCACCTTCAACTATTTAAGCAAAAAAAAAAAGAAATTCTATGCTTG
AAAATAACATCGACGGTGAAGTCGATATATTTGAACTATTTTACTTTATTTGAAGATCATATGGGAGTTTTTGGTGTTAGATTTTCTTGAATACA
AGCTTATAAAAGCTCTTTATGTGTGTATCATTGTGTGTGTATATGAATGTCATTCTTCCTAAGAATAAAAGAAAAATGAATTTGCTACG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E309052] | SGN-U584923 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T121742 [Download][View] | Facility Assigned ID: TRZAA48TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.942 | Expected Error Rate: 0.0024 | Quality Trim Threshold: 14.5 |
Working
