EST details — SGN-E311054

Search information 
Request: 311054Match: SGN-E311054
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C99337Clone name: cLEZ-17-B22
cartOrder Clone
Library Name: cLEZOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: root
Development Stage: germinating seedlings

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C193520 [TUS-68-G22] Trace: SGN-T346407 EST: SGN-E545532 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C193520 [TUS-68-G22] Trace: SGN-T346408 EST: SGN-E545533 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E311054Length: 400 bp (1090 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E311054 [] (trimmed) GCTAAAGAGAGGAGAAGCTATGGCTACTCTTAGAAATCCAAGAAAATACCAATCTTTGATCATTCTTTTTCAGTTCTTTCTGTTAATACAAATCC
AATTAGTGTTCTGTTATCAATACAAAGTTGGAGATTTAAATGCTTGGAATATACCCTCTTCTGCAAATAAAGATGTCTATCTCAAATGGTCCAAG
AATCACATCTTCAAGCTTGGAGATTCAATCTTGTTTTTGTACCCACCAAGTGAAGATTCAGTGATACAGGTAACAAAACAGAATTACAACAGTTG
CAACCTTAAAAATCCAATCTTGTACATGAACAATGGGAATTCTCTGTTTAACATTACAAGACCTGTAGAGTTTTACTTCACAAGTGGAGCATAAG
GGCATTGTGAGAAGTTGCAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E311054] SGN-U565967 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T123479 [Download][View] Facility Assigned ID: TRZCP11TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.940 Expected Error Rate: 0.0117 Quality Trim Threshold: 12.5