Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E337717

Search information 
Request: 337717Match: SGN-E337717
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C136476Clone name: cTOE-17-H20
cartOrder Clone
Library Name: cTOEOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Crown gall
Development Stage: crown galls from full-grown plants (4-8 wks old)

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E337717Length: 541 bp (1057 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E337717 [] (trimmed) GCTCACTTAATTTGTCCACAATGCAGCTAACTCACTAACCCTGGGAACACACAAAAAAAAAAGAAAAAAAACACTCAAATATTATTGTAGAAAAT
ATGTTTCAAATAAGCTACATTGTGGTTTTCTTGATTTTAACTTCATTTTTTCCTTTAGGTTTTGGGATTTTCTTGAATGTTACTACTCTTCCTGG
TCAACATCCTGATCCTGAATCTGTTGCTCTTGAAGTTAATAGGAAAGTGAATGCATCACTCTCAATTTTCCAATCAAGAAGAAAAATGTTGTCCT
ACACACAATCCTCTTGTCAAACGGGTAACCCTATCGATGATTGTTGGCGATGTGACCATAGTTGGCAATTAAATCGCCAAAGACTAGCCGATTGT
GCCATCGGGTTCGGTCAATACGCCCTCGGTGGCAAAGGCGGTCGTTACTACGTGGTCACGTCATCCTCGGACCCGGACCCCGTGGACCCGCCACC
TGGCACTCTCCGATACGGGGTCATCCAAAAGGAACCGTTGTGGATAGTTTTCTCAGCTAGTATGGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E337717] SGN-U600955 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T151348 [Download][View] Facility Assigned ID: TAICP46TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0047 Quality Trim Threshold: 14.5