EST details — SGN-E340760

Search information 
Request: 340760Match: SGN-E340760
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C147761Clone name: cTOF-5-O13
cartOrder Clone
Library Name: cTOFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E340760Length: 626 bp (899 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E340760 [] (trimmed) GCTAGAGTTTACTGCTGTGGACAACCATGCCTCCCTGTTGGCCAGTCAGACATTCCTCGACAAAGCAGAGTGAATATATACTGTCCTCGATGTGA
AGATGCGTATACACCTCGGTCAAGATATCATGAGAACATTGATGGAGCTTACTTTGGAACCACATTTCCGCACCTGTTCTTGATGACTTATGGAC
ATCTCAAGCCACAGAAGATTTCTCAGAGCTACGTTCCCAGAGTTTTTGGTTTCAAGGTCCACAAGCCTTGATCCTGGTAGTGTTACCTACTGTCT
ATGTTTTCCTTATTAATGTGCTAGCAGAGGTAATGCTTTTAATAGCACATGTAGAATTGTAAGGTTCTGTTATAGGTTTTATTCTCATACAGGCT
TTGGAAGATGCTGTGTGATAACAAATTTACTTGGACTACGTTTATGTATGAATACAATTCTCCCTTGCTACAGTTTGTGCTTTTTTTGTTACCCT
GTGAGGATCTCTCAAATACTGCGTTACAAACTATTCTGTAGCGTGATTTGTATGTCAATGTACACCCAAGTATCGCAACTTGGATTTGACACATA
ATATTTTTTTTGTACATACACTTGACTTTTGGCCTGGGGTTTCAATTGAATGTCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E340760] SGN-U577511 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T153783 [Download][View] Facility Assigned ID: TOFAQ91THB
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0022 Quality Trim Threshold: 12.5